Pre_GI: BLASTP Hits

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Query: NC_009092:2282437:2297760 Shewanella loihica PV-4, complete genome

Start: 2297760, End: 2299187, Length: 1428

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016901:2594942:2594942259494225963781437Shewanella baltica OS678 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit I0915
NC_009997:2635025:2635025263502526364611437Shewanella baltica OS195, complete genomecytochrome c oxidase, cbb3-type, subunit I0915
NC_009052:2512373:2547126254712625485621437Shewanella baltica OS155, complete genomecytochrome c oxidase, cbb3-type, subunit I0915
NC_014541:2122788:2135700213570021371301431Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit I0848
NC_016602:1994110:1994110199411019955371428Vibrio furnissii NCTC 11218 chromosome 1, complete sequencecytochrome c oxidase, Cbb3-type, subunit I0830
NC_016745:2229271:2234039223403922353761338Oceanimonas sp. GK1 chromosome, complete genomecbb3-type cytochrome c oxidase subunit I0791
NC_021150:1965264:1987433198743319888751443Azotobacter vinelandii CA6, complete genomecbb3-type cytochrome c oxidase subunit I0768
NC_012560:1965251:1987420198742019888621443Azotobacter vinelandii DJ, complete genomecytochrome c oxidase, cbb3-type, subunit I0768
NC_007492:2035761:2039457203945720408811425Pseudomonas fluorescens PfO-1, complete genomeCytochrome c oxidase cbb3-type, subunit I0758
NC_008702:1432952:1460596146059614620201425Azoarcus sp. BH72, complete genomeprobable cytochrome c oxidase, cbb3-type,subunit I0756
NC_007492:2035761:2035761203576120372031443Pseudomonas fluorescens PfO-1, complete genomeCytochrome c oxidase cbb3-type, subunit I0748
NC_009379:435404:4459844459844474261443Polynucleobacter sp. QLW-P1DMWA-1, complete genomecytochrome c oxidase, cbb3-type, subunit I0745
NC_007005:4062311:4077945407794540793871443Pseudomonas syringae pv. syringae B728a, complete genomeCytochrome c oxidase cbb3-type, subunit I0741
NC_005773:3851433:3866057386605738674991443Pseudomonas syringae pv. phaseolicola 1448A, complete genomecytochrome c oxidase, cbb3-type, subunit I0737
NC_007298:778723:7835877835877850141428Dechloromonas aromatica RCB, complete genomeCytochrome c oxidase cbb3-type, subunit I0734
NC_014910:3458475:3472486347248634739251440Alicycliphilus denitrificans BC chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit i0733
NC_015422:1163752:1170428117042811718671440Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit I0733
NC_004578:2185907:2186515218651521879571443Pseudomonas syringae pv. tomato str. DC3000, complete genomecytochrome c oxidase, cbb3-type, subunit I0729
NC_008782:1136732:1139894113989411413331440Acidovorax sp. JS42, complete genomecytochrome c oxidase, cbb3-type, subunit I0719
NC_011992:1038985:1042150104215010435891440Acidovorax ebreus TPSY, complete genomecytochrome c oxidase, cbb3-type, subunit I0719
NC_012848:320883:3426373426373442591623Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,cytochrome c oxidase, cbb3-type, subunit I3e-169595
NC_013422:2004478:2015536201553620169961461Halothiobacillus neapolitanus c2, complete genomecytochrome c oxidase, cbb3-type, subunit I9e-168590
NC_020126:7896447:7918373791837379207332361Myxococcus stipitatus DSM 14675, complete genomebifunctional cbb3-type cytochrome c oxidase subunit I/II2e-167589
NC_008095:6877388:6889429688942968918102382Myxococcus xanthus DK 1622, complete genomecytochrome c oxidase, cbb3-type, subunit I/II1e-164579
NC_009465:29735:3979839798412161419Candidatus Vesicomyosocius okutanii HA, complete genomecbb3-type cytochrome c oxidase subunit I1e-159563
NC_014934:2223822:2223822222382222260202199Cellulophaga algicola DSM 14237 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit i1e-156553
NC_010118:133256:1469581469581491682211Candidatus Sulcia muelleri GWSS, complete genomebifunctional cytochrome c oxidase subunits ccoN/O1e-128460
NC_014166:3072703:3080775308077530822411467Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecbb3-type cytochrome c oxidase subunit I2e-122439
NC_009714:1329573:1332880133288013343461467Campylobacter hominis ATCC BAA-381, complete genomecbb3-type cytochrome c oxidase subunit I3e-119429
NC_011146:1429836:1432591143259114339941404Geobacter bemidjiensis Bem, complete genomecytochrome c oxidase subunit I1e-118427
NC_020541:1827689:1845788184578818474041617Rhodanobacter sp. 2APBS1, complete genomeCbb3-type cytochrome oxidase, subunit 15e-55215
NC_006513:1695487:1716225171622517178531629Azoarcus sp. EbN1, complete genomecytochrome C oxidase subunit transmembrane protein1e-53211
NC_012856:2266187:2266187226618722678391653Ralstonia pickettii 12D chromosome 1, complete genomeCytochrome-c oxidase4e-52206
NC_015458:1938860:1939570193957019412191650Pusillimonas sp. T7-7 chromosome, complete genomecytochrome C oxidase subunit transmembrane protein2e-51204
NC_012660:2045398:2066634206663420680311398Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cytochrome C subunit protein7e-38158
NC_012440:373863:3738633738633752541392Persephonella marina EX-H1, complete genomeputative cytochrome c oxidase, subunit I4e-37156
NC_010547:31444:5220552205539291725Cyanothece sp. ATCC 51142 chromosome linear, complete sequencecytochrome c oxidase subunit I3e-1273.6
NC_008312:409830:4282934282934299811689Trichodesmium erythraeum IMS101, complete genomeCytochrome-c oxidase2e-1067.4
NC_013730:6901725:6910170691017069120531884Spirosoma linguale DSM 74, complete genomeCytochrome-c oxidase6e-1065.9
NC_005125:760721:7916257916257932891665Gloeobacter violaceus PCC 7421, complete genomecytochrome c oxidase subunit I1e-0964.7
NC_011884:1029328:1047387104738710491501764Cyanothece sp. PCC 7425, complete genomecytochrome c oxidase, subunit I3e-0963.9
NC_013959:1059004:1104867110486711062431377Sideroxydans lithotrophicus ES-1 chromosome, complete genomeNitric-oxide reductase8e-0962.4
NC_009956:88354:1138011138011163622562Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequencecytochrome c oxidase subunit I type9e-0962
NC_014655:2366201:2390772239077223926341863Leadbetterella byssophila DSM 17132 chromosome, complete genomecytochrome c oxidase subunit i2e-0861.2
NC_020054:1335699:1345346134534613472321887Fibrella aestuarina BUZ 2 drat genomeCytochrome-c oxidase2e-0860.8
NC_008699:1673181:1720885172088517225701686Nocardioides sp. JS614, complete genomecytochrome c oxidase, subunit I2e-0860.8
NC_015914:2658845:2668167266816726700591893Cyclobacterium marinum DSM 745 chromosome, complete genomecytochrome c oxidase subunit I2e-0860.8
NC_012791:721813:7549587549587569461989Variovorax paradoxus S110 chromosome 1, complete genomecytochrome c oxidase, subunit I3e-0860.5
NC_007947:1556437:1557045155704515589401896Methylobacillus flagellatus KT, complete genomeCytochrome-c oxidase3e-0860.1
NC_010172:57500:99011990111009271917Methylobacterium extorquens PA1, complete genomecytochrome c oxidase, subunit I5e-0859.3
NC_003106:2060628:2061779206177920635601782Sulfolobus tokodaii str. 7, complete genomehypothetical cytochrome c oxidase polypeptide I1e-0655.1
NC_015703:3444025:3452488345248834543681881Runella slithyformis DSM 19594 chromosome, complete genomecytochrome c oxidase subunit I1e-0655.1
NC_016830:81382:99479994791010651587Pseudomonas fluorescens F113 chromosome, complete genomeprotein CoxA2e-0653.9
NC_019897:1224798:1248033124803312497211689Thermobacillus composti KWC4 chromosome, complete genomeheme/copper-type cytochrome/quinol oxidase, subunit 12e-0653.9
NC_016645:633988:6359736359736376401668Pyrobaculum sp. 1860 chromosome, complete genomecytochrome-c oxidase5e-0652.8
NC_015379:89441:1139901139901155821593Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative cytochrome-c oxidase, subunit I9e-0652