Pre_GI: BLASTP Hits

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Query: NC_009092:1684467:1693317 Shewanella loihica PV-4, complete genome

Start: 1693317, End: 1694948, Length: 1632

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:2258800:2268392226839222700411650Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-112407
NC_014644:1275038:1281340128134012828691530Gardnerella vaginalis ATCC 14019 chromosome, complete genomehypothetical protein4e-44179
NC_017378:1489818:1497185149718514988041620Helicobacter pylori Puno120 chromosome, complete genomehypothetical protein3e-38160
NC_002939:579087:5846235846235861611539Geobacter sulfurreducens PCA, complete genomehypothetical protein4e-30133
NC_017365:1466500:147128514712851472205921Helicobacter pylori F30, complete genomehypothetical protein2e-28127
NC_011662:2320100:2360274236027423618751602Thauera sp. MZ1T, complete genomehypothetical protein2e-26120
NC_019908:21970:4453144531461621632Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein4e-21103
NC_015510:2209663:2220794222079422225811788Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein6e-21102
NC_009667:1371924:1381448138144813834692022Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencehypothetical protein5e-2099.8
NC_008800:1300500:1311562131156213135682007Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative DNA-binding protein2e-1894.4
NC_009801:3013838:3028075302807530300932019Escherichia coli E24377A, complete genomehypothetical protein2e-1894
NC_012580:301500:3349373349373365021566Vibrio cholerae M66-2 chromosome II, complete sequencehypothetical protein4e-1790.1
NC_009667:1203861:1216524121652412181971674Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencehypothetical protein1e-1688.6
NC_016602:2854107:2863424286342428654632040Vibrio furnissii NCTC 11218 chromosome 1, complete sequencephage-related hypothetical protein3e-1687
NC_016514:891772:9045959045959066132019Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein4e-1687
NC_011094:2791719:2816150281615028181622013Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-1585.5
NC_008209:2367500:2373866237386623758031938Roseobacter denitrificans OCh 114, complete genomehypothetical protein9e-1685.5
NC_006350:595893:6440906440906461622073Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein1e-1585.1
NC_015508:296856:3063403063403080791740Agrobacterium sp. H13-3 chromosome linear, complete sequencehypothetical protein2e-1584.7
NC_017098:1149145:1170484117048411726102127Spirochaeta africana DSM 8902 chromosome, complete genomereverse transcriptase2e-1584.3
NC_010694:2492378:2500860250086025028692010Erwinia tasmaniensis, complete genomeProbable RNA-directed DNA polymerase (Reverse transcriptase)2e-1584.3
NC_004547:1174650:1183908118390811859172010Erwinia carotovora subsp. atroseptica SCRI1043, complete genomephage-related hypothetical protein3e-1584
NC_013889:1740858:1750200175020017514231224Thioalkalivibrio sp. K90mix chromosome, complete genome9e-1582
NC_008253:2828573:2839884283988428412541371Escherichia coli 536, complete genomehypothetical protein2e-1480.9
NC_013889:2603914:2611990261199026134861497Thioalkalivibrio sp. K90mix chromosome, complete genomehypothetical protein4e-1480.1
NC_020911:1859210:1871263187126318731971935Octadecabacter antarcticus 307, complete genomehypothetical protein1e-1378.2
NC_014500:564864:5885285885285905702043Dickeya dadantii 3937 chromosome, complete genomephage abortive infection protein3e-1377
NC_020063:1051310:1062071106207110640231953Enterobacteriaceae bacterium strain FGI 57, complete genomeReverse transcriptase (RNA-dependent DNA polymerase)4e-1376.6
NC_014761:1795304:1805102180510218069251824Oceanithermus profundus DSM 14977 chromosome, complete genomehypothetical protein6e-1169.3
NC_014171:261952:2619522619522638651914Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein2e-0964.3
NC_015968:74124:8289082890848451956Enterobacter asburiae LF7a chromosome, complete genomeputative DNA-binding protein2e-0861.2
NC_013851:3478153:3485243348524334869131671Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-0860.1
NC_003919:169510:1777091777091792261518Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein1e-0758.5