Pre_GI: BLASTP Hits

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Query: NC_009092:1305355:1325148 Shewanella loihica PV-4, complete genome

Start: 1325148, End: 1325852, Length: 705

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012560:2315350:2328791232879123298461056Azotobacter vinelandii DJ, complete genomemajor outer membrane porin OprF4e-1685.1
NC_021150:2315362:2328803232880323298581056Azotobacter vinelandii CA6, complete genomemajor outer membrane porin OprF4e-1685.1
NC_020126:2216926:2216926221692622225475622Myxococcus stipitatus DSM 14675, complete genomekelch domain-containing protein5e-1581.3
NC_016940:3696570:3718781371878137200371257Saprospira grandis str. Lewin chromosome, complete genomethrombospondin repeat-containing OmpA/MotB family outer membrane protein4e-1478.2
NC_012997:59407:6160761607627281122Teredinibacter turnerae T7901, complete genomeHAD-superfamily hydrolase subfamily IA, variant 34e-1478.2
NC_015844:1100664:1118656111865611199991344Zobellia galactanivorans, complete genomeOmpA-like periplasmic protein2e-1376.3
NC_002947:1268089:128476812847681285562795Pseudomonas putida KT2440, complete genomeOmpA family protein4e-1374.7
NC_003454:865368:874650874650875123474Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeOuter membrane protein9e-1373.9
NC_020126:3426439:3428991342899134307541764Myxococcus stipitatus DSM 14675, complete genomeOmpA family protein2e-1272.4
NC_012489:4336790:4381096438109643824691374Gemmatimonas aurantiaca T-27, complete genomehypothetical protein3e-1272
NC_018691:3496420:3498657349865734997571101Alcanivorax dieselolei B5 chromosome, complete genomeOmpA family protein4e-1272
NC_011146:1429836:1436878143687814381821305Geobacter bemidjiensis Bem, complete genomeOmpA/MotB domain protein5e-1271.2
NC_015410:3093465:309471930947193095507789Pseudomonas mendocina NK-01 chromosome, complete genomeOmpA/MotB domain-containing protein5e-1271.2
NC_012721:137046:1552481552481569571710Burkholderia glumae BGR1 chromosome 2, complete genomeOuter membrane protein2e-1169.7
NC_010162:3275265:3287242328724232889781737Sorangium cellulosum 'So ce 56', complete genomeompA family outer membrane protein1e-1169.7
NC_011146:63912:6391263912649131002Geobacter bemidjiensis Bem, complete genomeOmpA/MotB domain protein2e-1168.9
NC_002947:1268089:128406112840611284753693Pseudomonas putida KT2440, complete genomeOmpA family protein3e-1168.9
NC_010410:513298:516898516898517377480Acinetobacter baumannii AYE, complete genomeputative lipoprotein precursor1e-1067
NC_010611:3381500:339535633953563395736381Acinetobacter baumannii ACICU, complete genomeOuter membrane protein1e-1067
NC_008313:691692:7089587089587102351278Ralstonia eutropha H16 chromosome 1, complete sequenceouter membrane protein2e-1066.2
NC_010524:4644587:468662446866244687313690Leptothrix cholodnii SP-6, complete genomeOmpA/MotB domain protein7e-1064.3
NC_008095:2420066:2421541242154124234601920Myxococcus xanthus DK 1622, complete genomeOmpA domain protein6e-1064.3
NC_018012:4054000:4069815406981540708341020Thiocystis violascens DSM 198 chromosome, complete genomeouter membrane protein/peptidoglycan-associated (lipo)protein6e-1064.3
NC_014315:2485527:248979224897922490541750Nitrosococcus watsoni C-113 chromosome, complete genomeOmpA/MotB domain-containing protein8e-1063.9
NC_004757:1089057:111289511128951113557663Nitrosomonas europaea ATCC 19718, complete genomeBacterial outer membrane protein8e-1063.9
NC_007484:882341:896807896807897553747Nitrosococcus oceani ATCC 19707, complete genomeOmpA/MotB9e-1063.9
NC_015638:1029721:104898210489821049917936Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeOmpA/MotB domain-containing protein1e-0963.5
NC_007912:335500:3542733542733553671095Saccharophagus degradans 2-40, complete genomehypothetical protein1e-0963.5
NC_011027:858565:871203871203871901699Chlorobaculum parvum NCIB 8327, complete genomeOmpA/MotB domain protein2e-0963.2
NC_006351:101500:1156751156751173511677Burkholderia pseudomallei K96243 chromosome 2, complete sequenceOmpA family membrane protein2e-0962.8
NC_007435:1914375:1954129195412919558051677Burkholderia pseudomallei 1710b chromosome II, complete sequenceOmpA family membrane protein2e-0962.8
NC_008536:5192235:5196369519636951991042736Solibacter usitatus Ellin6076, complete genomeOmpA/MotB domain protein3e-0962
NC_014355:1865003:191019019101901911167978Candidatus Nitrospira defluvii, complete genomehypothetical protein4e-0962
NC_009446:351042:357509357509358405897Dichelobacter nodosus VCS1703A, complete genomeOmpA family protein4e-0961.6
NC_015144:124500:1403551403551413681014Weeksella virosa DSM 16922 chromosome, complete genomeOmpA/MotB domain protein6e-0961.2
NC_008314:1275617:1290293129029312916001308Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein, OmpA/MotB-family7e-0960.8
NC_009615:1148990:1158652115865211599891338Parabacteroides distasonis ATCC 8503 chromosome, complete genomeouter membrane lipoprotein7e-0960.8
NC_013730:906389:926388926388927098711Spirosoma linguale DSM 74, complete genomeOmpA/MotB domain protein1e-0860.5
NC_020126:7285452:728988972898897290641753Myxococcus stipitatus DSM 14675, complete genomeOmpA family protein1e-0860.5
NC_010805:1576735:1584211158421115855091299Burkholderia multivorans ATCC 17616 chromosome 2, completeOmpA/MotB domain protein1e-0860.5
NC_010086:871723:8897988897988910931296Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion system OmpA/MotB family protein1e-0860.1
NC_016628:1190366:120417312041731205123951Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceouter membrane protein OmpA2e-0859.7
NC_015424:3277292:3284182328418232857201539Aeromonas veronii B565 chromosome, complete genomeputative porin2e-0859.7
NC_014310:811977:839738839738840580843Ralstonia solanacearum PSI07 megaplasmid, complete sequenceouter membrane protein; ompa/motb domain2e-0859.3
NC_003296:941920:959306959306960139834Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE LIPOPROTEIN2e-0859.3
NC_007511:719493:720847720847721356510Burkholderia sp. 383 chromosome 2, complete sequenceouter membrane protein, OmpA/MotB family2e-0859.3
NC_012997:4491871:450815545081554509069915Teredinibacter turnerae T7901, complete genomeOmpA/MotB domain protein2e-0859.3
NC_008782:2568027:261999826199982620654657Acidovorax sp. JS42, complete genomeOmpA/MotB domain protein2e-0859.3
NC_013730:4914000:493163549316354932492858Spirosoma linguale DSM 74, complete genomeOmpA/MotB domain protein3e-0858.9
NC_017059:747624:756885756885757763879Rhodospirillum photometricum DSM 122, complete genomeOuter membrane protein OmpA3e-0858.9
NC_015422:2078618:208388020838802084539660Alicycliphilus denitrificans K601 chromosome, complete genomeOmpA/MotB domain-containing protein3e-0858.9
NC_014910:1912552:191535619153561916078723Alicycliphilus denitrificans BC chromosome, complete genomeompa/motb domain protein4e-0858.5
NC_012997:2367400:2367400236740023770869687Teredinibacter turnerae T7901, complete genomeconserved repeat domain protein5e-0858.2
NC_007519:3527207:354461935446193545347729Desulfovibrio alaskensis G20 chromosome, complete genomechemotaxis protein MotB5e-0858.2
NC_011001:2517159:253259025325902533099510Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative OmpA/MotB family outer membrane protein5e-0858.2
NC_006138:225832:242832242832243482651Desulfotalea psychrophila LSv54, complete genomeouter membrane protein F6e-0857.8
NC_017030:7557295:7572578757257875744641887Corallococcus coralloides DSM 2259 chromosome, complete genomeOmpA domain-containing protein6e-0857.8
NC_010084:3173757:317869531786953179645951Burkholderia multivorans ATCC 17616 chromosome 1, completeOmpA/MotB domain-containing protein9e-0857
NC_010804:324396:345127345127346077951Burkholderia multivorans ATCC 17616 chromosome 1, completeOOP family OmpA-OmpF porin9e-0857
NC_013223:1349000:135998013599801360948969Desulfohalobium retbaense DSM 5692, complete genomeOmpA/MotB domain protein1e-0757
NC_008781:2925818:293240929324092933041633Polaromonas naphthalenivorans CJ2, complete genomeOmpA/MotB domain protein1e-0756.6
NC_010515:2358134:235948923594892360001513Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceOmpA/MotB domain protein1e-0756.6
NC_008543:2035292:204929820492982049810513Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceOmpA/MotB domain protein2e-0756.2
NC_008061:428501:429856429856430368513Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceOmpA/MotB2e-0756.2
NC_011026:2269986:2297669229766922988651197Chloroherpeton thalassium ATCC 35110, complete genomeOmpA/MotB domain protein2e-0756.2
NC_015563:3786192:381049638104963811038543Delftia sp. Cs1-4 chromosome, complete genomepeptidoglycan-associated lipoprotein2e-0756.2
NC_014118:1171411:1189956118995611911881233Burkholderia sp. CCGE1002 chromosome chromosome 2, completeOmpA/MotB domain protein2e-0755.8
NC_015703:5649260:5666667566666756686912025Runella slithyformis DSM 19594 chromosome, complete genomeOmpA/MotB domain-containing protein2e-0755.8
NC_015222:1607757:162435516243551625188834Nitrosomonas sp. AL212 chromosome, complete genomeOmpA/MotB domain-containing protein3e-0755.5
NC_013894:1380564:1403308140330814043151008Thermocrinis albus DSM 14484 chromosome, complete genomeOmpA/MotB domain protein3e-0755.5
NC_011146:1293202:1308919130891913102711353Geobacter bemidjiensis Bem, complete genomeOmpA/MotB domain protein3e-0755.5
NC_010552:2089140:210537221053722105884513Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceOmpA/MotB domain protein4e-0755.1
NC_015376:2061990:207370420737042074372669Burkholderia gladioli BSR3 chromosome chromosome 2, completeputative outer membrane protein A precursor4e-0755.1
NC_011769:247202:2472022472022482391038Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeOmpA/MotB domain protein4e-0755.1
NC_013730:58840:5884058840601381299Spirosoma linguale DSM 74, complete genomeOmpA/MotB domain protein4e-0755.1
NC_010524:1005355:102201010220101022741732Leptothrix cholodnii SP-6, complete genomeOmpA/MotB domain protein4e-0755.1
NC_012660:2431803:243278924327892433676888Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein5e-0754.7
NC_020126:2979959:2981739298173929840512313Myxococcus stipitatus DSM 14675, complete genomeOmpA family protein5e-0754.7
NC_008391:271254:2861002861002873981299Burkholderia cepacia AMMD chromosome 2, complete sequenceOmpA/MotB domain protein5e-0754.7
NC_012721:1395417:1416969141696914187771809Burkholderia glumae BGR1 chromosome 2, complete genomeOuter membrane protein6e-0754.3
NC_020126:3979792:3993089399308939945161428Myxococcus stipitatus DSM 14675, complete genomeOmpA family protein7e-0754.3
NC_013956:4579759:4594394459439445961811788Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein7e-0754.3
NC_013282:1256769:1257931125793112593281398Cronobacter turicensis, complete genomehypothetical protein1e-0653.9
NC_007333:1743890:1800887180088718024521566Thermobifida fusca YX, complete genomesimilar to Outer membrane protein and related peptidoglycan-associated (lipo)proteins9e-0753.9
NC_010644:485966:4859664859664889472982Elusimicrobium minutum Pei191, complete genomeOmpA/MotB domain-containing protein8e-0753.9
NC_018000:3009864:300986430098643010610747Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein8e-0753.9
NC_007511:1094050:1108818110881811101221305Burkholderia sp. 383 chromosome 2, complete sequencehypothetical protein1e-0653.5
NC_014933:364463:3704573704573717161260Bacteroides helcogenes P 36-108 chromosome, complete genomeOmpA/MotB domain protein1e-0653.5
NC_015167:1911758:193046019304601931167708Cellulophaga lytica DSM 7489 chromosome, complete genomeOmpA/MotB domain-containing protein1e-0653.5
NC_018012:1935500:195096919509691951517549Thiocystis violascens DSM 198 chromosome, complete genomepeptidoglycan-associated lipoprotein1e-0653.5
NC_015703:234960:2487722487722507782007Runella slithyformis DSM 19594 chromosome, complete genomeOmpA/MotB domain-containing protein1e-0653.5
NC_002927:3716894:371994637199463720527582Bordetella bronchiseptica RB50, complete genomeouter membrane protein A precursor1e-0653.5
NC_013517:1055854:108386910838691084408540Sebaldella termitidis ATCC 33386, complete genomeOmpA/MotB domain protein1e-0653.1
NC_007298:778723:817714817714818487774Dechloromonas aromatica RCB, complete genomeflagellar motor protein1e-0653.1
NC_009832:1946401:1963068196306819647771710Serratia proteamaculans 568, complete genomeOmpA/MotB domain protein1e-0653.1
NC_007645:3712272:3731957373195737334081452Hahella chejuensis KCTC 2396, complete genomeOuter membrane protein and related peptidoglycan-associated (lipo)protein2e-0653.1
NC_012559:731859:736808736808737485678Laribacter hongkongensis HLHK9, complete genomeOmpA/MotB2e-0653.1
NC_015711:7601733:760436676043667604833468Myxococcus fulvus HW-1 chromosome, complete genomepeptidoglycan-associated lipoprotein (Pal) family protein2e-0652.8
NC_010552:592154:5921545921545939171764Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceOmpA/MotB domain protein3e-0652.4
NC_010814:3673983:369606836960683696910843Geobacter lovleyi SZ, complete genomeOmpA/MotB domain protein3e-0652.4
NC_011770:4924127:493007949300794930792714Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-0652.4
NC_018748:2119679:2127421212742121285781158Emticicia oligotrophica DSM 17448 chromosome, complete genomeOmpA/MotB domain protein3e-0652
NC_002516:891000:907594907594908307714Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-0652
NC_008463:4743296:474329647432964744009714Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein4e-0652
NC_016112:2903767:291230229123022913093792Methylomicrobium alcaliphilum chromosome, complete genomeOmpA/MotB domain-containing protein5e-0651.6
NC_008789:350650:388958388958389698741Halorhodospira halophila SL1, complete genomeOmpA/MotB domain protein6e-0651.2
NC_007510:409843:441925441925442887963Burkholderia sp. 383 chromosome 1, complete sequenceouter membrane protein, OmpA/MotB family6e-0651.2
NC_017030:6297351:6300610630061063021601551Corallococcus coralloides DSM 2259 chromosome, complete genomeouter membrane porin F8e-0650.8
NC_017192:1745114:1763507176350717660712565Arcobacter sp. L, complete genomehypothetical protein8e-0650.8
NC_009617:4911595:492938549293854930140756Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeOmpA/MotB domain-containing protein9e-0650.4
NC_013037:2043921:205187520518752052819945Dyadobacter fermentans DSM 18053, complete genomeOmpA/MotB domain protein9e-0650.4