Pre_GI: BLASTP Hits

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Query: NC_009092:1127000:1144881 Shewanella loihica PV-4, complete genome

Start: 1144881, End: 1146173, Length: 1293

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014816:1592799:1592799159279915960233225Asticcacaulis excentricus CB 48 chromosome 1, complete sequenceti-type conjugative transfer relaxase traa2e-29130
NC_015508:296856:2968562968563006473792Agrobacterium sp. H13-3 chromosome linear, complete sequenceConjugal transfer protein traA1e-28127
NC_011365:502620:5087915087915101941404Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeMobA/MobL protein1e-26121
NC_010125:2295500:2301968230196823033711404Gluconacetobacter diazotrophicus PAl 5, complete genomeputative mobilization protein A1e-26121
NC_016026:1224129:1241326124132612434102085Micavibrio aeruginosavorus ARL-13 chromosome, complete genomemobA/MobL family protein3e-22106
NC_015259:3902136:3902136390213639042412106Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTi-type conjugative transfer relaxase TraA1e-1997.8
NC_017271:3641705:3666804366680436684141611Xanthomonas campestris pv. raphani 756C chromosome, completeMobA-MobL family protein1e-1894.7
NC_003919:3812778:3840055384005538416471593Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid mobilization protein1e-1894.7
NC_010688:1192410:1230572123057212321581587Xanthomonas campestris pv. campestris, complete genomeputative conjugal transfer protein9e-1891.7
NC_010688:3515885:3538586353858635401781593Xanthomonas campestris pv. campestris, complete genomeMobA/MobL family protein3e-1790.1
NC_010688:3030873:3040681304068130422761596Xanthomonas campestris pv. campestris, complete genomeplasmid mobilization protein1e-1687.8
NC_007508:1221500:1252752125275212543531602Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeMobA/MobL family protein2e-1687.4
NC_016010:1822212:1878854187885418804971644Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeplasmid mobilization protein4e-1582.8
NC_010688:3229820:3243901324390132455261626Xanthomonas campestris pv. campestris, complete genomeplasmid mobilization protein2e-1480.9
NC_003919:1716831:1739162173916217407601599Xanthomonas axonopodis pv. citri str. 306, complete genomeplasmid mobilization protein7e-1479
NC_009656:5505413:5514427551442755156501224Pseudomonas aeruginosa PA7 chromosome, complete genomemobilization protein2e-1377
NC_007508:1221500:1228615122861512306662052Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative MobA/MobL family protein2e-1377
NC_015603:1:17117122312061Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequencenickase5e-1375.9
NC_007086:2887875:2907735290773529093781644Xanthomonas campestris pv. campestris str. 8004, complete genomeplasmid mobilization protein6e-1375.9
NC_014828:541874:5560295560295574741446Ethanoligenens harbinense YUAN-3 chromosome, complete genome6e-1272.4
NC_017202:56000:7778377783798792097Bacillus thuringiensis serovar chinensis CT-43 plasmid pCT127,Nickase TraA1e-1171.2
NC_013316:2033906:2054064205406420555151452Clostridium difficile R20291, complete genome4e-1169.7
NC_012891:1277966:1292370129237012938541485Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,hypothetical protein1e-1067.8
NC_007086:2887875:292775329277532928598846Xanthomonas campestris pv. campestris str. 8004, complete genomeplasmid mobilization protein4e-1066.6
NC_017028:1030000:1046311104631110504474137Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA4e-1066.2
NC_017044:702483:7137857137857179214137Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugal transfer protein TraA5e-1066.2
NC_014006:3124818:3167502316750231703452844Sphingobium japonicum UT26S chromosome 1, complete genomeconjugal transfer protein TraA1e-0965.1
NC_017028:1030000:103036510303651031309945Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeconjugal transfer protein TraA4e-0963.2
NC_013716:2139952:2152084215208421535981515Citrobacter rodentium ICC168, complete genomeputative MobA/MobL family mobilization protein6e-0962.4
NC_014217:2760898:2762803276280327657602958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA3e-0860.1
NC_008253:1938975:1954359195435919558611503Escherichia coli 536, complete genomehypothetical protein5e-0859.3
NC_004431:2185750:2201204220120422027061503Escherichia coli CFT073, complete genomehypothetical protein5e-0859.3
NC_011149:1987291:2004722200472220062271506Salmonella enterica subsp. enterica serovar Agona str. SL483,MobA/MobL family1e-0758.2
NC_004547:3207776:3243722324372232451251404Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative plasmid mobilization protein2e-0757.8
NC_009445:838281:8382818382818412923012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA2e-0757.4
NC_011274:2044000:2061616206161620631361521Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91Conjugal transfer protein3e-0756.6
NC_011205:2180598:2197505219750521990251521Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853MobA/MobL family protein3e-0756.6
NC_011294:2053991:2070488207048820720081521Salmonella enterica subsp. enterica serovar Enteritidis strconjugal transfer protein3e-0756.6
NC_016831:947281:9714039714039729231521Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Conjugal transfer protein3e-0756.6
NC_015977:3424178:3466782346678234680711290Roseburia hominis A2-183 chromosome, complete genomehypothetical protein3e-0756.6
NC_014727:1485656:149873614987361499374639Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,nickase, traa like protein4e-0756.2
NC_009720:464078:4822914822914852482958Xanthobacter autotrophicus Py2, complete genomeconjugal transfer relaxase TraA5e-0755.8
NC_010338:359940:3722873722873751452859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA1e-0654.7
NC_014217:2020737:2020737202073720236942958Starkeya novella DSM 506 chromosome, complete genomeTi-type conjugative transfer relaxase TraA1e-0654.7
NC_011745:2209288:2252468225246822539491482Escherichia coli ED1a chromosome, complete genomeputative mobilization protein1e-0654.7
NC_004547:1873390:1909271190927119107311461Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeprobable plasmid-related protein1e-0654.7
NC_016832:948029:9618499618499633601512Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,MobA/MobL2e-0654.3
NC_012781:700226:7232517232517248311581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein2e-0653.9
NC_012781:2552723:2573928257392825755081581Eubacterium rectale ATCC 33656, complete genomeputative conjugal transfer protein2e-0653.9
NC_002678:763808:7856497856497886963048Mesorhizobium loti MAFF303099, complete genomeprobable conjugal transfer protein traA4e-0653.1
NC_007958:4371125:4393639439363943967583120Rhodopseudomonas palustris BisB5, complete genomeMobA/MobL protein5e-0652.8
NC_015675:5607297:5632354563235456354013048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA5e-0652.8
NC_009445:1316000:1316372131637213193262955Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA6e-0652.4
NC_010338:1216385:1217970121797012208282859Caulobacter sp. K31, complete genomeTi-type conjugative transfer relaxase TraA7e-0652.4
NC_009445:6424000:6443614644361464466253012Bradyrhizobium sp. ORS 278 chromosome, complete genomeconjugal transfer relaxase TraA8e-0652
NC_015675:4565500:4576462457646245795093048Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTi-type conjugative transfer relaxase TraA1e-0551.6