Pre_GI: BLASTP Hits

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Query: NC_009085:893601:909395 Acinetobacter baumannii ATCC 17978, complete genome

Start: 909395, End: 909742, Length: 348

Host Lineage: Acinetobacter baumannii; Acinetobacter; Moraxellaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated from a case of meningitis. Causes opportunistic infections in hospitals. This bacterium is commonly isolated from the hospital environment and hospitalized patients. It is an aquatic organism, and is often cultured from liquid medical samples such as respiratory secretions, wounds, and urine. Acinetobacter also colonizes irrigating solutions and intravenous solutions. Although it has low virulence, it is capable of causing infection. Most isolates recovered from patients represent colonization rather than infection. When infections do occur, they usually occur in the blood, or in organs with a high fluid content, such as the lungs or urinary tract. Infections by this organism are becoming increasingly problematic due to the high number of resistance genes found in clinical isolates. Some strains are now resistant to all known antibiotics. Most of these genes appear to have been transferred horizontally from other organisms.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011595:3015895:302083630208363021183348Acinetobacter baumannii AB307-0294, complete genomehypothetical protein1e-63241
NC_017075:2293209:230344023034402303844405Rubrivivax gelatinosus IL144, complete genomehypothetical protein2e-1271.2
NC_013194:4034854:403871240387124039014303Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completecold-shock DNA-binding protein family9e-1268.9
NC_007948:3541987:355141135514113551992582Polaromonas sp. JS666, complete genomecold-shock DNA-binding domain protein2e-1167.4
NC_016147:151224:167376167376167663288Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecold-shock DNA-binding protein family3e-1167
NC_004459:2443000:257510025751002575567468Vibrio vulnificus CMCP6 chromosome I, complete sequenceCold shock domain family protein4e-1167
NC_013173:2884887:289990228999022900072171Desulfomicrobium baculatum DSM 4028, complete genome5e-1166.6
NC_006513:1695487:170804017080401708609570Azoarcus sp. EbN1, complete genomeprobable cold shock family protein1e-1065.5
NC_012108:2542328:255697125569712557495525Desulfobacterium autotrophicum HRM2, complete genomeputative cold shock domain family protein1e-1065.1
NC_004603:1897532:190226619022661902760495Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein6e-1062.8
NC_009439:1174432:117984611798461180316471Pseudomonas mendocina ymp, complete genomehypothetical protein7e-1062.8
NC_009092:521519:542808542808543425618Shewanella loihica PV-4, complete genomecold-shock DNA-binding domain protein3e-0960.8
NC_004347:718091:748237748237748848612Shewanella oneidensis MR-1, complete genomecold shock domain family protein3e-0960.5
NC_010506:5195000:520433252043325204952621Shewanella woodyi ATCC 51908, complete genomecold-shock DNA-binding domain protein1e-0858.5
NC_006138:225832:252701252701253288588Desulfotalea psychrophila LSv54, complete genomehypothetical protein3e-0753.9
NC_008751:1043269:108077710807771081310534Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeputative cold-shock DNA-binding domain protein6e-0753.1
NC_002937:1915787:192581719258171926353537Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completecold shock domain protein1e-0652