Pre_GI: BLASTP Hits

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Query: NC_009077:2308634:2309804 Mycobacterium sp. JLS, complete genome

Start: 2309804, End: 2310280, Length: 477

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism was isolated from creosote-contaminated soil from the Champion International Superfund site in Libby, Montana, USA. This microbe, along with some others collected at this site, is able to rapidly mineralize 14C-labeled pyrene. Phylogenetic studies based on the rRNA 16S gene confirmed that strains collected at this site were distinct from one another and also from other known Mycobacterium isolates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014814:3364336:337963933796393380121483Mycobacterium sp. Spyr1 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family5e-63239
NC_013595:4951396:496504449650444965529486Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-51201
NC_013169:612456:641378641378641875498Kytococcus sedentarius DSM 20547, complete genomeRNA polymerase sigma factor, sigma-70 family2e-46184
NC_008278:132000:146785146785147303519Frankia alni ACN14a, complete genomePutative RNA polymerase ECF-subfamily sigma factor3e-43173
NC_007777:2964500:298966629896662990505840Frankia sp. CcI3, complete genomesigma-244e-0960.5
NC_016582:10159486:101755861017558610176125540Streptomyces bingchenggensis BCW-1 chromosome, complete genomeECF subfamily RNA polymerase sigma factor2e-0858.2
NC_019892:3086493:3099373309937331026813309Singulisphaera acidiphila DSM 18658 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0755.1
NC_006350:1938631:196639319663931966929537Burkholderia pseudomallei K96243 chromosome 1, complete sequenceRNA polymerase sigma-70 factor3e-0754.3
NC_002944:2373873:239794423979442398834891Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein3e-0754.3
NC_015311:2626850:266808926680892668571483Prevotella denticola F0289 chromosome, complete genomeSigma-70 region 23e-0754.3
NC_009921:3384116:338747933874793388363885Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.3
NC_013929:9038500:903995490399549040901948Streptomyces scabiei 87.22 chromosome, complete genomesigma factor7e-0753.1
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H1e-0652.4
NC_015656:632960:640915640915641499585Frankia symbiont of Datisca glomerata chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0652.4
NC_013929:3953046:396964339696433970329687Streptomyces scabiei 87.22 chromosome, complete genomesigma factor2e-0651.6
NC_013235:1325975:133005913300591330667609Nakamurella multipartita DSM 44233, complete genometranscriptional regulator, LuxR family3e-0651.2
NC_009664:4423829:467450146745014674992492Kineococcus radiotolerans SRS30216, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.2
NC_009142:267550:269255269255269797543Saccharopolyspora erythraea NRRL 2338, complete genomeRNA polymerase sigma-70 factor, ECF family3e-0650.8
NC_013510:5394432:542642554264255427285861Thermomonospora curvata DSM 43183, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0650.4
NC_003888:6853107:686230768623076863275969Streptomyces coelicolor A3(2), complete genomesigma factor5e-0650.4
NC_014211:174694:178206178206179093888Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidRNA polymerase, sigma-24 subunit, ECF subfamily6e-0650.1
NC_011894:2811573:282499228249922825498507Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0649.7
NC_013131:7530000:754581375458137546373561Catenulispora acidiphila DSM 44928, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0649.3