Pre_GI: BLASTP Hits

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Query: NC_009012:3421000:3425321 Clostridium thermocellum ATCC 27405, complete genome

Start: 3425321, End: 3425713, Length: 393

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011898:426951:451644451644452030387Clostridium cellulolyticum H10, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase3e-1993.6
NC_014219:567033:568440568440568937498Bacillus selenitireducens MLS10 chromosome, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase8e-1682.4
NC_014976:2735423:273681827368182737300483Bacillus subtilis BSn5 chromosome, complete genomeserine-protein kinase RsbW6e-1476.3
NC_019896:3491000:351797535179753518457483Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeSigma B negative effector RsbW6e-1476.3
NC_016047:637778:639173639173639655483Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeanti-sigma B factor6e-1476.3
NC_000964:521975:521975521975522457483Bacillus subtilis subsp. subtilis str. 168, complete genomeserine-protein kinase RsbW6e-1476.3
NC_014479:509919:510245510245510727483Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeserine-protein kinase RsbW5e-1476.3
NC_017191:467207:467533467533468015483Bacillus amyloliquefaciens XH7 chromosome, complete genomeserine-protein kinase RsbW3e-1373.6
NC_017188:461177:461503461503461985483Bacillus amyloliquefaciens TA208 chromosome, complete genomeserine-protein kinase RsbW3e-1373.6
NC_020410:495184:495510495510495992483Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeSerine-protein kinase rsbW3e-1373.6
NC_014614:6115:111521115211604453Clostridium sticklandii, complete genomeRsbW6e-1372.8
NC_019842:484933:484933484933485415483Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,serine-protein kinase RsbW1e-1271.6
NC_009725:496443:496769496769497251483Bacillus amyloliquefaciens FZB42, complete genomeRsbW1e-1271.6
NC_009922:1:9821982110249429Alkaliphilus oremlandii OhILAs, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase2e-1271.2
NC_013316:1:945094509857408Clostridium difficile R20291, complete genomeanti-sigma-B factor (serine-protein kinase)2e-1270.9
NC_009089:1:945094509857408Clostridium difficile 630, complete genomeanti-sigma-B factor (serine-protein kinase)2e-1270.9
NC_004193:375416:655372655372655848477Oceanobacillus iheyensis HTE831, complete genomeserine-protein kinase RsbW3e-1270.5
NC_017190:466236:466236466236466718483Bacillus amyloliquefaciens LL3 chromosome, complete genomeswitch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein)4e-1270.1
NC_014551:483773:484099484099484581483Bacillus amyloliquefaciens DSM 7, complete genomeswitch protein/serine kinase and anti-sigma factor (inhibitory sigma-B binding protein)4e-1270.1
NC_006582:883922:885764885764886246483Bacillus clausii KSM-K16, complete genomeserine-protein kinase RsbW7e-1269.3
NC_018665:2563375:258357925835792584061483Exiguobacterium antarcticum B7 chromosome, complete genomeAnti-sigma regulatory factor, serine/threonine protein kinase1e-1168.2
NC_010556:2773396:279377327937732794255483Exiguobacterium sibiricum 255-15, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase3e-1167
NC_012673:2023297:202674620267462027225480Exiguobacterium sp. AT1b, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase3e-1063.9
NC_018704:347948:351804351804352277474Amphibacillus xylanus NBRC 15112, complete genomeanti-sigma B factor3e-1063.9
NC_012121:1578190:159459615945961595075480Staphylococcus carnosus subsp. carnosus TM300, complete genomeanti-sigmaB factor7e-0855.8
NC_018664:1:948094809899420Clostridium acidurici 9a chromosome, complete genomeputative serine-protein kinase6e-0752.8
NC_013595:9149273:916488991648899165314426Streptosporangium roseum DSM 43021, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase5e-0649.7