Pre_GI: BLASTP Hits

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Query: NC_009012:1934107:1940837 Clostridium thermocellum ATCC 27405, complete genome

Start: 1940837, End: 1941841, Length: 1005

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016627:4270949:4292248429224842932521005Clostridium clariflavum DSM 19732 chromosome, complete genomeLysM domain-containing protein0659
NC_016627:4323370:4331700433170043327041005Clostridium clariflavum DSM 19732 chromosome, complete genomeLysM domain-containing protein0657
NC_010003:449192:4591684591684601721005Petrotoga mobilis SJ95, complete genomePeptidoglycan-binding LysM0652
NC_018870:2316499:2332898233289823339021005Thermacetogenium phaeum DSM 12270 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase0651
NC_014410:800500:832230832230832850621Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,N-acetylmuramoyl-L-alanine amidase family 22e-105382
NC_014219:999648:102183810218381022626789Bacillus selenitireducens MLS10 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 21e-74280
NC_014410:800500:832829832829833233405Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Peptidoglycan-binding lysin domain4e-64245
NC_016791:4038069:404435640443564045249894Clostridium sp. BNL1100 chromosome, complete genomeLysM domain-containing protein5e-58224
NC_011837:2605409:263099826309982631708711Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-50199
NC_009706:2673906:269949526994952700196702Clostridium kluyveri DSM 555 chromosome, complete genomeamidase2e-50199
NC_011898:3367457:337481433748143375515702Clostridium cellulolyticum H10, complete genomeN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD7e-50197
NC_010320:1268355:130854013085401309241702Thermoanaerobacter sp. X514 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-44178
NC_014538:1598106:160514016051401605841702Thermoanaerobacter sp. X513 chromosome, complete genomeSporulation domain-containing protein6e-44178
NC_010337:2793667:281957328195732820295723Heliobacterium modesticaldum Ice1, complete genomen-acetylmuramoyl-l-alanine amidase precursor, putative8e-44177
NC_009633:4097536:410895041089504109639690Alkaliphilus metalliredigens QYMF chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-42173
NC_014393:4775452:4786268478626847877341467Clostridium cellulovorans 743B chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 25e-39161
NC_007907:5104476:510447651044765105237762Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-1067.8
NC_006270:3418097:3431919343191934329981080Bacillus licheniformis ATCC 14580, complete genomeN-acetylmuramoyl-L-alanine amidase4e-0859.3
NC_006322:3418268:3432091343209134331701080Bacillus licheniformis ATCC 14580, complete genomeBlyA4e-0859.3
NC_015957:8816355:881713688171368817906771Streptomyces violaceusniger Tu 4113 chromosome, complete genomepeptidoglycan-binding lysin domain-containing protein6e-0858.5
NC_020291:795500:851136851136851813678Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeLysM domain-containing protein1e-0757.4
NC_011830:1504497:152165615216561522327672Desulfitobacterium hafniense DCB-2, complete genomePeptidoglycan-binding LysM1e-0757.4
NC_016943:1735057:1737586173758617409573372Blastococcus saxobsidens DD2, complete genomeputative LysM domain peptidoglycan-binding protein5e-0755.8
NC_010723:915697:926873926873927535663Clostridium botulinum E3 str. Alaska E43, complete genomepeptidoglycan-binding LysM4e-0755.8
NC_013406:6052913:605565560556556056374720Paenibacillus sp. Y412MC10 chromosome, complete genomepeptidoglycan-binding lysin domain-containing protein5e-0755.5
NC_002928:507749:535893535893536444552Bordetella parapertussis 12822, complete genomehypothetical protein1e-0654.7
NC_002927:506183:537246537246537797552Bordetella bronchiseptica RB50, complete genomehypothetical protein1e-0654.7
NC_009674:2678932:2680144268014426812081065Bacillus cytotoxicus NVH 391-98 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0652.8
NC_015975:1493636:1498171149817115003482178Lactobacillus ruminis ATCC 27782 chromosome, complete genomeAutolysin5e-0652.4
NC_014220:1732254:174994817499481750697750Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase family 26e-0652
NC_018515:3411276:342770634277063428368663Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeLysM domain-containing protein7e-0652