Pre_GI: BLASTP Hits

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Query: NC_008593:2250871:2261396 Clostridium novyi NT, complete genome

Start: 2261396, End: 2262019, Length: 624

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014328:3482980:349262534926253493245621Clostridium ljungdahlii ATCC 49587 chromosome, complete genomecobalt-precorrin-8X methylmutase1e-88325
NC_021182:1245692:125534812553481255974627Clostridium pasteurianum BC1, complete genomeprecorrin isomerase1e-86319
NC_004557:749330:758813758813759469657Clostridium tetani E88, complete genomeprecorrin-8X methylmutase7e-80296
NC_017295:1507956:151991715199171520534618Clostridium acetobutylicum EA 2018 chromosome, complete genomeprecorrin-8X methylmutase1e-78292
NC_015687:1508664:152210415221041522721618Clostridium acetobutylicum DSM 1731 chromosome, complete genomeprecorrin-8X methylmutase1e-78292
NC_003030:1510000:152050315205031521120618Clostridium acetobutylicum ATCC 824, complete genomeprecorrin-8X methylmutase1e-78292
NC_003366:1427785:142953914295391430168630Clostridium perfringens str. 13, complete genomeprecorrin-8X methylmutase3e-75281
NC_015519:488550:487904487904488557654Tepidanaerobacter sp. Re1 chromosome, complete genomePrecorrin-8X methylmutase3e-56218
NC_014633:442755:467361467361468008648Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceprecorrin-8X methylmutase1e-51202
NC_014734:3086165:309441030944103095042633Paludibacter propionicigenes WB4 chromosome, complete genomeprecorriN-8x methylmutase1e-51202
NC_013517:1055854:109418510941851094820636Sebaldella termitidis ATCC 33386, complete genomePrecorrin-8X methylmutase2e-50198
NC_009633:74500:909929099291612621Alkaliphilus metalliredigens QYMF chromosome, complete genomeprecorrin-8X methylmutase CbiC/CobH5e-50197
NC_011898:1558208:159003415900341590669636Clostridium cellulolyticum H10, complete genomePrecorrin-8X methylmutase CbiC/CobH3e-46184
NC_012962:1827000:183301218330121833644633Photorhabdus asymbiotica, complete genomeprecorrin-8x methylmutase (precorrin isomerase)1e-45182
NC_016627:4203775:420609942060994206728630Clostridium clariflavum DSM 19732 chromosome, complete genomeprecorrin isomerase1e-44179
NC_010001:1702350:172303317230331723677645Clostridium phytofermentans ISDg, complete genomePrecorrin-8X methylmutase CbiC/CobH1e-42172
NC_015690:7518732:752124675212467521896651Paenibacillus mucilaginosus KNP414 chromosome, complete genomeputative cobalt-precorrin-8X methylmutase1e-38159
NC_020409:621792:635176635176635814639Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeCobalt-precorrin-8X methylmutase2e-38158
NC_016641:1085862:109712510971251097769645Paenibacillus terrae HPL-003 chromosome, complete genomecobalt-precorrin-8X methylmutase6e-37154
NC_012491:1263469:127437712743771275027651Brevibacillus brevis NBRC 100599, complete genomeputative cobalt-precorrin-8X methylmutase6e-37153
NC_021171:415771:422486422486423133648Bacillus sp. 1NLA3E, complete genomeprecorrin-8X methylmutase CbiC2e-36152
NC_014483:4957315:496993949699394970583645Paenibacillus polymyxa E681 chromosome, complete genomeCobalt-precorrin-8X methylmutase (Cobalt-precorrin isomerase) (HBA synthase)3e-36151
NC_014622:5315500:532822753282275328871645Paenibacillus polymyxa SC2 chromosome, complete genomeprecorrin-8x methylmutase cbic1e-35149
NC_010382:3350816:336492033649203365579660Lysinibacillus sphaericus C3-41, complete genomecobalt-precorrin-8X methylmutase2e-35148
NC_011094:2061000:209035220903522090984633Salmonella enterica subsp. enterica serovar Schwarzengrund strcobalt-precorrin-8X methylmutase1e-34146
NC_011149:2040396:206866420686642069296633Salmonella enterica subsp. enterica serovar Agona str. SL483,cobalt-precorrin-8X methylmutase1e-34145
NC_013892:853366:866031866031866684654Xenorhabdus bovienii SS-2004 chromosome, complete genomecobalt-precorrin-8X methylmutase4e-34144
NC_009253:2927802:293454729345472935170624Desulfotomaculum reducens MI-1 chromosome, complete genomeprecorrin-8X methylmutase CbiC/CobH4e-31134
NC_019903:1058657:106969810696981070336639Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,precorrin isomerase1e-30132
NC_006138:225832:235347235347235979633Desulfotalea psychrophila LSv54, complete genomeprecorrin-8X methylmutase (CobH)3e-30131
NC_000909:858840:860301860301860933633Methanocaldococcus jannaschii DSM 2661, complete genomeprecorrin-8X methylmutase1e-26119
NC_008010:105665:1286091286091301711563Deinococcus geothermalis DSM 11300 plasmid 1, complete sequencePrecorrin-8X methylmutase CbiC/CobH1e-26119
NC_011059:1391734:1408793140879314102021410Prosthecochloris aestuarii DSM 271, complete genomeprecorrin-3B C17-methyltransferase1e-26119
NC_015565:624298:639284639284639910627Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completePrecorrin-8X methylmutase4e-25114
NC_003106:1809137:1836234183623418372351002Sulfolobus tokodaii str. 7, complete genomeprecorrin-8X methylmutase5e-24110
NC_007181:333891:3418823418823429041023Sulfolobus acidocaldarius DSM 639, complete genomeprecorrin-8X methylmutase3e-23108
NC_019673:2733327:273271027327102733330621Saccharothrix espanaensis DSM 44229 complete genomePrecorrin-8X methylmutase5e-23107
NC_015065:232240:241130241130241753624Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequencePrecorrin-8X methylmutase9e-23106
NC_008148:672608:679679679679680278600Rubrobacter xylanophilus DSM 9941, complete genomePrecorrin-8X methylmutase CbiC/CobH2e-22105
NC_013159:1807599:183057818305781831243666Saccharomonospora viridis DSM 43017, complete genomeprecorrin-8X methylmutase7e-22103
NC_016800:1219121:123600312360031236653651Corynebacterium diphtheriae BH8 chromosome, complete genomeprecorrin-8X methylmutase1e-21103
NC_016789:1232993:125157212515721252222651Corynebacterium diphtheriae PW8 chromosome, complete genomeprecorrin-8X methylmutase1e-21103
NC_016783:1216708:123347212334721234122651Corynebacterium diphtheriae INCA 402 chromosome, complete genomeprecorrin-8X methylmutase2e-21102
NC_010511:2703684:270368427036842704316633Methylobacterium sp. 4-46 chromosome, complete genomeprecorrin-8X methylmutase6e-2097.4
NC_021177:4258102:427337942733794274005627Streptomyces fulvissimus DSM 40593, complete genomePrecorrin-8X methylmutase2e-1995.5
NC_008595:2432184:245390424539042454425522Mycobacterium avium 104, complete genomeprecorrin-8X methylmutase3e-1892
NC_003888:3602753:362500736250073625663657Streptomyces coelicolor A3(2), complete genomeprecorrin-8X methylmutase3e-1891.7
NC_011758:326366:329961329961330593633Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completePrecorrin-8X methylmutase5e-1890.9
NC_012588:87592:989389893899936999Sulfolobus islandicus M.14.25 chromosome, complete genomebifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase2e-1789.4
NC_012589:87592:989389893899936999Sulfolobus islandicus L.S.2.15, complete genomePrecorrin-8X methylmutase CbiC/CobH2e-1789.4
NC_012632:87590:989369893699934999Sulfolobus islandicus M.16.27 chromosome, complete genomebifunctional sirohydrochlorin cobalt chelatase/precorrin-8X methylmutase2e-1789.4
NC_013769:87582:989429894299940999Sulfolobus islandicus L.D.8.5 chromosome, complete genomeprecorrin-8X methylmutase CbiC/CobH2e-1789.4
NC_017276:85380:987859878599783999Sulfolobus islandicus REY15A chromosome, complete genomeprecorrin-8X methylmutase CbiC/CobH2e-1789.4
NC_009481:82767:856748567486309636Synechococcus sp. WH 7803 chromosome, complete genomeprecorrin-8X methylmutase1e-1686.3
NC_020829:636773:656579656579657205627Pseudomonas denitrificans ATCC 13867, complete genomeprecorrin-8X methylmutase2e-1685.5
NC_007434:2290934:231002323100232310649627Burkholderia pseudomallei 1710b chromosome I, complete sequenceprecorrin-8X methylmutase4e-1581.3
NC_007355:729498:752491752491753228738Methanosarcina barkeri str. fusaro chromosome 1, complete sequenceprecorrin-8X methylmutase5e-1580.9
NC_020157:36234:4271042710438221113Anabaena cylindrica PCC 7122 plasmid pANACY.02, complete sequencePrecorrin-8X methylmutase CbiC/CobH2e-1272.4
NC_014166:2149984:216180321618032162513711Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeprecorrin-8X methylmutase CbiC/CobH7e-1270.5