Pre_GI: BLASTP Hits

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Query: NC_008593:196257:200097 Clostridium novyi NT, complete genome

Start: 200097, End: 200708, Length: 612

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:198315:204840204840205409570Clostridium botulinum BKT015925 chromosome, complete genomemembrane protein5e-70263
NC_021182:2422226:242566124256612426251591Clostridium pasteurianum BC1, complete genomehypothetical protein5e-38157
NC_017295:389500:389635389635390213579Clostridium acetobutylicum EA 2018 chromosome, complete genomehypothetical protein2e-37155
NC_015687:389500:389641389641390219579Clostridium acetobutylicum DSM 1731 chromosome, complete genomehypothetical protein2e-37155
NC_003030:389500:389645389645390223579Clostridium acetobutylicum ATCC 824, complete genomeUncharacterized membrane protein, homolog of YPAA B.subtilis2e-37155
NC_014393:187454:208501208501209106606Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein1e-33142
NC_008593:1631438:164791616479161648512597Clostridium novyi NT, complete genomeuncharacterized membrane protein1e-31136
NC_009089:4140764:415671641567164157306591Clostridium difficile 630, complete genomehypothetical protein7e-31133
NC_013316:4018451:403503840350384035655618Clostridium difficile R20291, complete genomehypothetical protein1e-30132
NC_015425:1867620:188721518872151887847633Clostridium botulinum BKT015925 chromosome, complete genomemembrane protein1e-29129
NC_018664:2459994:248022024802202480981762Clostridium acidurici 9a chromosome, complete genomehypothetical protein4e-23107
NC_015958:2361551:236511223651122365648537Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehypothetical protein2e-21102
NC_010320:819326:833722833722834249528Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein1e-2099.8
NC_015555:277364:285307285307285807501Thermoanaerobacterium xylanolyticum LX-11 chromosome, completemembrane protein-like protein protein2e-1995.9
NC_009922:490500:501560501560502069510Alkaliphilus oremlandii OhILAs, complete genomemembrane protein1e-1686.3
NC_014624:3561756:356274735627473563340594Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein3e-1478.6
NC_015385:351393:369454369454370110657Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein6e-1477.4
NC_014833:1488994:150870815087081509334627Ruminococcus albus 7 chromosome, complete genomehypothetical protein7e-0650.4