Pre_GI: BLASTP Hits

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Query: NC_008593:1917118:1929869 Clostridium novyi NT, complete genome

Start: 1929869, End: 1930819, Length: 951

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014393:1221000:122684512268451227795951Clostridium cellulovorans 743B chromosome, complete genomesulfite reductase, subunit C5e-140497
NC_013517:599949:603817603817604785969Sebaldella termitidis ATCC 33386, complete genomesulfite reductase, subunit C3e-118424
NC_019978:1244000:1264703126470312657071005Halobacteroides halobius DSM 5150, complete genomesulfite reductase, subunit C3e-116417
NC_013410:155236:168481168481169341861Fibrobacter succinogenes subsp. succinogenes S85 chromosome,nitrite and sulfite reductase 4Fe-4S region2e-32139
NC_011832:1148859:116995011699501170816867Candidatus Methanosphaerula palustris E1-9c, complete genomenitrite and sulphite reductase 4Fe-4S region4e-31135
NC_009012:2953638:300970530097053010577873Clostridium thermocellum ATCC 27405, complete genomenitrite and sulphite reductase 4Fe-4S region5e-27122
NC_013887:1383127:1390223139022313920881866Methanocaldococcus sp. FS406-22 chromosome, complete genomenitrite and sulphite reductase 4Fe-4S region7e-26118
NC_008593:1917118:194008919400891941003915Clostridium novyi NT, complete genomeanaerobic sulfite reductase subunit C3e-24112
NC_015425:2144639:216585321658532166767915Clostridium botulinum BKT015925 chromosome, complete genomeanaerobic sulfite reductase subunit C3e-23109
NC_015636:468500:4691744691744710541881Methanothermococcus okinawensis IH1 chromosome, complete genomecoenzyme F420 hydrogenase6e-23108
NC_009635:800000:8010868010868029421857Methanococcus aeolicus Nankai-3 chromosome, complete genomenitrite and sulfite reductase 4Fe-4S region3e-2099.4
NC_010001:2176394:219506721950672196020954Clostridium phytofermentans ISDg, complete genomenitrite and sulphite reductase 4Fe-4S region2e-1686.7
NC_015636:41968:574895748958298810Methanothermococcus okinawensis IH1 chromosome, complete genomenitrite and sulfite reductase 4Fe-4S region4e-1685.5
NC_013156:728397:749616749616750431816Methanocaldococcus fervens AG86, complete genomenitrite and sulphite reductase 4Fe-4S region4e-1479
NC_000909:467607:487102487102487929828Methanocaldococcus jannaschii DSM 2661, complete genomenitrite reductase (nirA) isolog2e-1273.6
NC_009376:794562:8041688041688054061239Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomesulfite reductase, dissimilatory-type alpha subunit3e-1169.3
NC_016885:809000:8414018414018426391239Pyrobaculum oguniense TE7 chromosome, complete genomesulfite reductase, dissimilatory-type alpha subunit6e-1168.6
NC_010525:285805:2992682992683005061239Thermoproteus neutrophilus V24Sta, complete genomesulfite reductase, dissimilatory-type alpha subunit8e-1168.2
NC_007644:1638083:1666191166619116672131023Moorella thermoacetica ATCC 39073, complete genomeHydrogensulfite reductase2e-1067
NC_012560:2315350:2334014233401423364642451Azotobacter vinelandii DJ, complete genomeAssimilatory Nitrite reductase,large subunit; NasA2e-1067
NC_021150:2315362:2334026233402623364762451Azotobacter vinelandii CA6, complete genomeAssimilatory Nitrite reductase,large subunit; NasA2e-1067
NC_016070:371185:3838973838973851141218Thermoproteus tenax Kra 1, complete genomesulfite reductase, dissimilatory-type subunit alpha3e-1066.2
NC_011830:923424:9601249601249611821059Desulfitobacterium hafniense DCB-2, complete genomenitrite and sulphite reductase 4Fe-4S region3e-1065.9
NC_013859:421500:4372904372904398422553Azospirillum sp. B510 plasmid pAB510e, complete sequencenitrite reductase (NAD(P)H) large subunit4e-1065.5
NC_007907:5056036:506100450610045061696693Desulfitobacterium hafniense Y51, complete genomehypothetical protein7e-1064.7
NC_014622:3525017:3531707353170735341392433Paenibacillus polymyxa SC2 chromosome, complete genomenitrite reductase [nad(p)h], large subunit3e-0962.8
NC_014483:3235968:3241191324119132436232433Paenibacillus polymyxa E681 chromosome, complete genomeNitrite reductase (NAD(P)H)5e-0962
NC_013959:156991:1737391737391761832445Sideroxydans lithotrophicus ES-1 chromosome, complete genomenitrite reductase (NAD(P)H), large subunit6e-0961.6
NC_007626:2354260:2406579240657924086602082Magnetospirillum magneticum AMB-1, complete genomeSulfite reductase8e-0961.6
NC_012121:1894148:1903691190369119060962406Staphylococcus carnosus subsp. carnosus TM300, complete genomeNirB8e-0961.2
NC_007644:1638083:1664993166499316660601068Moorella thermoacetica ATCC 39073, complete genomeHydrogensulfite reductase1e-0860.8
NC_015064:2421034:2442971244297124447191749Acidobacterium sp. MP5ACTX9 chromosome, complete genomenitrite and sulphite reductase 4Fe-4S region4e-0859.3
NC_004461:2002000:2014067201406720164722406Staphylococcus epidermidis ATCC 12228, complete genomenitrite reductase4e-0858.9
NC_003364:1528762:1546018154601815472621245Pyrobaculum aerophilum str. IM2, complete genomesulfite reductase alpha subunit5e-0858.9
NC_017353:646195:6494676494676518722406Staphylococcus lugdunensis N920143, complete genomenitrite reductase large subunit6e-0858.5
NC_003364:1528762:1533962153396215352091248Pyrobaculum aerophilum str. IM2, complete genomesulfite reductase alpha subunit8e-0858.2
NC_016941:2395502:2407584240758424099892406Staphylococcus aureus subsp. aureus MSHR1132, complete genomenitrite reductase large subunit1e-0757.8
NC_013450:2463271:2474546247454624769512406Staphylococcus aureus subsp. aureus ED98, complete genomenitrite reductase [NAD(P)H], large subunit1e-0757.8
NC_009632:2545419:2559075255907525614802406Staphylococcus aureus subsp. aureus JH1 chromosome, completenitrite reductase (NAD(P)H) large subunit1e-0757.8
NC_002745:2446722:2457997245799724604022406Staphylococcus aureus subsp. aureus N315, complete genomenitrite reductase1e-0757.8
NC_002953:2435667:2450570245057024529752406Staphylococcus aureus subsp. aureus MSSA476, complete genomenitrite reductase large subunit1e-0757.8
NC_003923:2460130:2471404247140424738092406Staphylococcus aureus subsp. aureus MW2, complete genomenitrite reductase1e-0757.8
NC_007622:2399347:2410620241062024130252406Staphylococcus aureus RF122, complete genomenitrite reductase1e-0757.8
NC_002758:2515310:2529016252901625314212406Staphylococcus aureus subsp. aureus Mu50, complete genomenitrite reductase1e-0757.8
NC_009782:2519379:2530654253065425330592406Staphylococcus aureus subsp. aureus Mu3, complete genomenitrite reductase1e-0757.8
NC_017338:2456000:2466865246686524692702406Staphylococcus aureus subsp. aureus JKD6159 chromosome, completenitrite reductase, large subunit1e-0757.8
NC_016928:2411486:2422760242276024251652406Staphylococcus aureus subsp. aureus M013 chromosome, completeNitrite reductase large subunit1e-0757.8
NC_017343:2367177:2380883238088323832882406Staphylococcus aureus subsp. aureus ECT-R 2, complete genomenitrite reductase1e-0757.8
NC_017351:2489460:2501334250133425037392406Staphylococcus aureus subsp. aureus 11819-97 chromosome, completenitrite reductase [NAD(P)H], large subunit1e-0757.8
NC_017347:2511783:2523058252305825254632406Staphylococcus aureus subsp. aureus T0131 chromosome, completeAssimilatory nitrite reductase [NAD(P)H], large subunit1e-0757.8
NC_017341:2544327:2555602255560225580072406Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,nitrite reductase, large subunit1e-0757.8
NC_016912:2329113:2340388234038823427932406Staphylococcus aureus subsp. aureus VC40 chromosome, completeassimilatory nitrite reductase [NAD(P)H], large subunit1e-0757.8
NC_009641:2513300:2527008252700825294132406Staphylococcus aureus subsp. aureus str. Newman chromosome,assimilatory nitrite reductase [NAD(P)H], large subunit1e-0757.8
NC_007795:2455468:2469175246917524715802406Staphylococcus aureus subsp. aureus NCTC 8325, complete genomeassimilatory nitrite reductase [NAD(P)H], large subunit, putative1e-0757.8
NC_007793:2510801:2522076252207625244812406Staphylococcus aureus subsp. aureus USA300, complete genomenitrite reductase [NAD(P)H], large subunit1e-0757.8
NC_010079:2510951:2522226252222625246312406Staphylococcus aureus subsp. aureus USA300_TCH1516, completenitrite reductase (NAD(P)H) large subunit1e-0757.8
NC_002951:2448000:2458510245851024609152406Staphylococcus aureus subsp. aureus COL, complete genomenitrite reductase [NAD(P)H], large subunit1e-0757.8
NC_017337:2478877:2491044249104424934492406Staphylococcus aureus subsp. aureus ED133 chromosome, completenitrite reductase1e-0757.8
NC_013791:1082951:1087514108751410899372424Bacillus pseudofirmus OF4 chromosome, complete genomeassimilatory nitrite reductase [NAD(P)H] large subunit1e-0757.4
NC_020409:437781:494156494156494821666Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeSulfite reductase, assimilatory-type1e-0757.4
NC_005070:2374850:2379775237977523813161542Synechococcus sp. WH 8102, complete genomeFerredoxin--nitrite reductase1e-0757.4
NC_016885:809000:8603188603188615501233Pyrobaculum oguniense TE7 chromosome, complete genomesulfite reductase, dissimilatory-type alpha subunit1e-0757.4
NC_002952:2550500:2562943256294325653482406Staphylococcus aureus subsp. aureus MRSA252, complete genomenitrite reductase large subunit1e-0757.4
NC_017342:857630:8631568631568655612406Staphylococcus aureus subsp. aureus TCH60 chromosome, completenitrite reductase1e-0757.4
NC_007168:665284:6704656704656728762412Staphylococcus haemolyticus JCSC1435, complete genomenitrite reductase2e-0757
NC_016070:371185:3852863852863865211236Thermoproteus tenax Kra 1, complete genomesulfite reductase, dissimilatory-type subunit alpha4e-0755.8
NC_000911:2747604:2769125276912527706331509Synechocystis sp. PCC 6803, complete genomeferredoxin--nitrite reductase8e-0754.7
NC_017039:2745432:2766953276695327684611509Synechocystis sp. PCC 6803 substr. PCC-P, complete genomeferredoxin--nitrite reductase8e-0754.7
NC_017052:2745420:2766941276694127684491509Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeferredoxin--nitrite reductase8e-0754.7
NC_014829:259707:2656092656092681192511Bacillus cellulosilyticus DSM 2522 chromosome, complete genomenitrite reductase (NAD(P)H), large subunit8e-0754.7
NC_014829:3562478:3572660357266035742851626Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeFerredoxin--nitrite reductase1e-0653.9
NC_012704:1979183:1984045198404519859941950Corynebacterium kroppenstedtii DSM 44385, complete genomesulfite reductase2e-0653.9
NC_014210:2597000:2599033259903326015342502Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,nitrite reductase (NAD(P)H), large subunit2e-0653.1
NC_021182:4058873:406031340603134061218906Clostridium pasteurianum BC1, complete genomeglycyl-radical enzyme activator family protein3e-0652.8
NC_007517:2515870:2531662253166225327771116Geobacter metallireducens GS-15, complete genome4Fe-4S ferredoxin, iron-sulfur binding protein6e-0652