Pre_GI: BLASTP Hits

Some Help

Query: NC_008268:442657:456425 Rhodococcus sp. RHA1, complete genome

Start: 456425, End: 457084, Length: 660

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008268:442657:443606443606444277672Rhodococcus sp. RHA1, complete genomeprobable tetracycline repressor protein4e-61234
NC_017904:1831071:183107118310711831727657Mycobacterium sp. MOTT36Y chromosome, complete genomeregulatory protein TetR2e-1789
NC_010676:2658495:268410526841052684884780Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, TetR family8e-1373.6
NC_019673:8161242:816215981621598162875717Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, TetR family1e-1273.2
NC_009664:1434974:145727214572721457886615Kineococcus radiotolerans SRS30216, complete genomeTetracyclin repressor domain protein3e-1272
NC_016111:986936:100046210004621001124663Streptomyces cattleya NRRL 8057, complete genomeTetR-family transcriptional regulator1e-1169.7
NC_014659:2769486:278075327807532781463711Rhodococcus equi 103S, complete genomeTetR family transcriptional regulator2e-1065.9
NC_003155:622993:634378634378635061684Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator1e-0859.7
NC_009664:1434974:145201714520171452733717Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family2e-0858.9
NC_014976:684000:689323689323690003681Bacillus subtilis BSn5 chromosome, complete genomeTranscriptional regulator3e-0858.5
NC_013929:5850599:586537458653745866114741Streptomyces scabiei 87.22 chromosome, complete genomeTetR family transcriptional regulator5e-0857.8
NC_013131:4473410:449156644915664492117552Catenulispora acidiphila DSM 44928, complete genometranscriptional regulator, TetR family1e-0756.6
NC_014815:6576983:658020065802006580892693Micromonospora sp. L5 chromosome, complete genomeregulatory protein tetr3e-0755.1
NC_008526:74500:104011104011104658648Lactobacillus casei ATCC 334, complete genomeTranscriptional regulator5e-0754.7
NC_014246:1545214:154879115487911549492702Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTetR family transcriptional regulator6e-0754.3
NC_008596:3404832:340867134086713409429759Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, TetR family protein1e-0653.1
NC_002944:99000:104739104739105512774Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein4e-0651.6
NC_015953:2603526:261081926108192611727909Streptomyces sp. SirexAA-E chromosome, complete genomeGntR family transcriptional regulator4e-0651.6
NC_010410:3606826:367271136727113673337627Acinetobacter baumannii AYE, complete genomeTetracycline repressor protein class G6e-0650.8
NC_015656:2565417:258060425806042581263660Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR7e-0650.8
NC_013947:6678000:668328666832866683963678Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family8e-0650.4
NC_009921:4948500:497210549721054972827723Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family9e-0650.4