Pre_GI: BLASTP Hits

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Query: NC_008268:3162824:3177841 Rhodococcus sp. RHA1, complete genome

Start: 3177841, End: 3178296, Length: 456

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014640:4193193:419984441998444200290447Achromobacter xylosoxidans A8 chromosome, complete genomeacyl dehydratase1e-30131
NC_009511:1781914:179017017901701790616447Sphingomonas wittichii RW1 chromosome, complete genomehypothetical protein2e-26117
NC_014834:2264108:229552422955242295970447Rhodopseudomonas palustris DX-1 chromosome, complete genomehypothetical protein6e-25112
NC_003888:5042283:506185950618595062311453Streptomyces coelicolor A3(2), complete genomehypothetical protein1e-1891.7
NC_010572:3363830:338583933858393386291453Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-1890.5
NC_013929:4186840:420456442045644205016453Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-1890.1
NC_015957:639774:659685659685660155471Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein2e-1788.2
NC_016109:3591401:361608936160893616547459Kitasatospora setae KM-6054, complete genomeputative fatty acid synthase2e-1787.4
NC_016114:3008500:300902330090233009475453Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeacyl dehydratase MaoC5e-1786.7
NC_009664:1569335:161422916142291614690462Kineococcus radiotolerans SRS30216, complete genomehypothetical protein1e-1271.6
NC_008705:3430839:343306334330633433521459Mycobacterium sp. KMS, complete genomeMaoC domain protein dehydratase3e-1270.9
NC_009077:3376351:337857533785753379033459Mycobacterium sp. JLS, complete genomeMaoC domain protein dehydratase3e-1270.9
NC_008146:3401743:340478134047813405239459Mycobacterium sp. MCS, complete genomeMaoC-like dehydratase3e-1270.9
NC_015172:1120000:112200611220061122467462Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeMaoC domain protein dehydratase3e-1270.9
NC_014831:2133060:216755921675592167954396Thermaerobacter marianensis DSM 12885 chromosome, complete genomeMaoC-like dehydratase4e-1167
NC_004193:701622:711095711095711544450Oceanobacillus iheyensis HTE831, complete genomehypothetical protein3e-1063.9
NC_016947:2380500:239645423964542396846393Mycobacterium intracellulare MOTT-02 chromosome, complete genomedehydratase4e-1063.9
NC_012522:7763426:776524077652407765689450Rhodococcus opacus B4, complete genomehypothetical protein1e-0962.4
NC_013174:601434:610171610171610653483Jonesia denitrificans DSM 20603, complete genomehypothetical protein5e-0856.6
NC_002944:4446083:445354144535414454065525Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein9e-0855.8
NC_008146:1016446:101689210168921017401510Mycobacterium sp. MCS, complete genomehypothetical protein2e-0754.7
NC_008705:1022252:102269810226981023207510Mycobacterium sp. KMS, complete genomeconserved hypothetical protein2e-0754.7
NC_009077:1027357:103131210313121031821510Mycobacterium sp. JLS, complete genomehypothetical protein1e-0652
NC_009077:5286275:530610253061025307055954Mycobacterium sp. JLS, complete genomeprotein of unknown function DUF352e-0651.2
NC_008595:2687245:268681426868142687248435Mycobacterium avium 104, complete genomehypothetical protein2e-0651.2
NC_008705:4975402:499248949924894993445957Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF353e-0650.8
NC_008146:4936262:495483149548314955787957Mycobacterium sp. MCS, complete genomeprotein of unknown function DUF353e-0650.8
NC_014830:3438504:347345834734583473970513Intrasporangium calvum DSM 43043 chromosome, complete genomehypothetical protein4e-0650.4