Pre_GI: BLASTP Hits

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Query: NC_008268:3162824:3167995 Rhodococcus sp. RHA1, complete genome

Start: 3167995, End: 3168951, Length: 957

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008726:4725389:472538947253894726282894Mycobacterium vanbaalenii PYR-1, complete genomeintradiol ring-cleavage dioxygenase7e-107387
NC_008391:111217:126199126199127080882Burkholderia cepacia AMMD chromosome 2, complete sequenceCatechol 1,2-dioxygenase3e-76285
NC_020453:1881904:188190418819041882788885Agromonas oligotrophica S58 DNA, complete genomehypothetical protein2e-72273
NC_007348:752692:776546776546777451906Ralstonia eutropha JMP134 chromosome 2, complete sequenceCatechol 1,2-dioxygenase5e-69261
NC_016943:2391366:240817124081712409109939Blastococcus saxobsidens DD2, complete genomehydroxyquinol 1,2-dioxygenase1e-66253
NC_010552:293703:296273296273297145873Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceintradiol ring-cleavage dioxygenase1e-59230
NC_008391:2253188:225428422542842255156873Burkholderia cepacia AMMD chromosome 2, complete sequenceintradiol ring-cleavage dioxygenase2e-59229
NC_008596:4104476:411306341130634113947885Mycobacterium smegmatis str. MC2 155, complete genomehydroxyquinol 1,2-dioxygenase6e-58224
NC_015381:1623587:166557016655701666448879Burkholderia gladioli BSR3 chromosome 1, complete sequencehydroxyquinol 1,2-dioxygenase2e-57223
NC_007948:360199:373453373453374319867Polaromonas sp. JS666, complete genomeintradiol ring-cleavage dioxygenase2e-49196
NC_007337:10464:227782277823545768Ralstonia eutropha JMP134 plasmid 1, complete sequenceCatechol dioxygenase, N-terminal2e-26120
NC_020209:1949500:197033019703301971259930Pseudomonas poae RE*1-1-14, complete genomecatechol 1,2-dioxygenase5e-26118
NC_011740:1494796:151755215175521518478927Escherichia fergusonii ATCC 35469, complete genomeCatechol 1,2-dioxygenase (1,2-CTD)2e-25116
NC_016585:1004000:100405610040561004976921Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencecatechol 1,2-dioxygenase3e-25116
NC_017986:5833819:583858458385845839519936Pseudomonas putida ND6 chromosome, complete genomeCatA4e-25115
NC_010170:1580832:158188615818861582668783Bordetella petrii, complete genomecatechol 1,2-dioxygenase5e-25115
NC_007951:3631772:365028136502813651063783Burkholderia xenovorans LB400 chromosome 1, complete sequence3-chlorocatechol 1,2-dioxygenase7e-25114
NC_013757:1343396:135837413583741359225852Geodermatophilus obscurus DSM 43160, complete genomecatechol 1,2-dioxygenase6e-24111
NC_015312:3290887:330300033030003303854855Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeCatechol 1,2-dioxygenase4e-23108
NC_002947:4167500:423583342358334236768936Pseudomonas putida KT2440, complete genomecatechol 1,2-dioxygenase2e-22106
NC_015727:1294532:129863312986331299535903Cupriavidus necator N-1 plasmid BB1p, complete sequencecatechol 1,2-dioxygenase CatA8e-22104
NC_014641:20103:240172401724772756Achromobacter xylosoxidans A8 plasmid pA81, complete sequencechlorocatechol 1,2-dioxygenase9e-22104
NC_010170:3944228:395768139576813958436756Bordetella petrii, complete genomecatechol 1,2-dioxygenase3e-21102
NC_007337:10464:304033040331164762Ralstonia eutropha JMP134 plasmid 1, complete sequenceCatechol dioxygenase, N-terminal1e-20100
NC_010552:592154:616424616424617326903Burkholderia ambifaria MC40-6 chromosome 2, complete sequencecatechol 1,2-dioxygenase2e-20100
NC_007492:3384077:339866733986673399593927Pseudomonas fluorescens PfO-1, complete genomeIntradiol ring-cleavage dioxygenase5e-2098.6
NC_010512:110932:125497125497126447951Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencecatechol 1,2-dioxygenase5e-2098.6
NC_011002:564654:566615566615567556942Burkholderia cenocepacia J2315 chromosome 3, complete sequencecatechol 1,2-dioxygenase 28e-1994.7
NC_015726:1813961:181723318172331818147915Cupriavidus necator N-1 chromosome 1, complete sequencecatechol 1,2-dioxygenase CatA2e-1893.6
NC_011894:2184956:218559121855912186319729Methylobacterium nodulans ORS 2060, complete genomeprotocatechuate 3,4-dioxygenase, beta subunit2e-0757
NC_015379:6226661:625024862502486250967720Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative protocatechuate 34-dioxygenase, beta-chain3e-0756.2
NC_008010:105665:104950104950105675726Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceProtocatechuate 3,4-dioxygenase, beta subunit5e-0755.5
NC_014311:2385666:240368024036802404345666Ralstonia solanacearum PSI07 chromosome, complete genomeprotocatechuate 3,4-dioxygenase6e-0755.1
NC_010338:4148667:416580941658094166522714Caulobacter sp. K31, complete genomeprotocatechuate 3,4-dioxygenase, beta subunit7e-0755.1
NC_009338:555587:558536558536559486951Mycobacterium gilvum PYR-GCK chromosome, complete genomeprotocatechuate 3,4-dioxygenase subunit beta5e-0652.4
NC_008705:1839983:184199118419911842854864Mycobacterium sp. KMS, complete genomeprotocatechuate 3,4-dioxygenase, beta subunit5e-0652
NC_008705:1839983:185540618554061856269864Mycobacterium sp. KMS, complete genomeprotocatechuate 3,4-dioxygenase, beta subunit5e-0652
NC_009077:1725683:177472517747251775522798Mycobacterium sp. JLS, complete genomeprotocatechuate 3,4-dioxygenase, beta subunit7e-0651.6