Pre_GI: BLASTP Hits

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Query: NC_008260:2340824:2357553 Alcanivorax borkumensis SK2, complete genome

Start: 2357553, End: 2358485, Length: 933

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014532:2664139:2708237270823727092411005Halomonas elongata DSM 2581, complete genomeTrbL/VirB6 plasmid conjugal transfer protein1e-22107
NC_015458:2338437:2352774235277423538561083Pusillimonas sp. T7-7 chromosome, complete genomeTraH protein9e-1167.8
NC_011985:3869998:386999838699983870930933Agrobacterium radiobacter K84 chromosome 1, complete genometype IV secretion protein AvhB61e-0963.9
NC_013722:3117442:3126963312696331280571095Xanthomonas albilineans, complete genomeputative conjugal transfer protein2e-0963.5
NC_015379:6226661:6236400623640062374521053Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative type IV secretion system protein virB63e-0963.2
NC_010170:3908500:392072539207253921675951Bordetella petrii, complete genometype IV secretion system protein VirB64e-0962.4
NC_010645:369408:3851343851343861861053Bordetella avium 197N, complete genomeconjugal transfer protein3e-0859.3
NC_002927:506183:5190955190955201471053Bordetella bronchiseptica RB50, complete genomeplasmid-related membrane protein4e-0858.9
NC_008542:483761:4941774941774953161140Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein2e-0757
NC_008060:2913671:293155729315572932468912Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceTrbL/VirB6 plasmid conjugal transfer protein2e-0756.6