Pre_GI: BLASTP Hits

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Query: NC_008253:4817864:4859803 Escherichia coli 536, complete genome

Start: 4859803, End: 4860186, Length: 384

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:4875997:491931349193134919696384Escherichia coli UTI89, complete genomehypothetical protein YjiD1e-69261
NC_011147:3075186:309509230950923095475384Salmonella enterica subsp. enterica serovar Paratyphi A strDNA replication/recombination/repair protein4e-1786.7
NC_006511:3079512:309941830994183099801384Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cytoplasmic protein4e-1786.7
NC_015761:2982000:299606129960612996471411Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-1683.2
NC_016832:3100683:312057731205773120786210Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Anti-adapter protein iraD2e-1167.4
NC_011149:3187022:320687232068723207084213Salmonella enterica subsp. enterica serovar Agona str. SL483,putative cytoplasmic protein2e-1167.4