Pre_GI: BLASTP Hits

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Query: NC_008228:4915500:4926595 Pseudoalteromonas atlantica T6c, complete genome

Start: 4926595, End: 4928490, Length: 1896

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016884:70955:9283792837946211785Sulfobacillus acidophilus DSM 10332 chromosome, complete genomehypothetical protein5e-99362
NC_015757:70790:9259792597943811785Sulfobacillus acidophilus TPY chromosome, complete genomehypothetical protein5e-99362
NC_010572:5445081:5475000547500054767601761Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-89330
NC_020126:5558613:5571827557182755737281902Myxococcus stipitatus DSM 14675, complete genomehypothetical protein3e-84313
NC_015671:3211972:3244025324402532457611737Cellvibrio gilvus ATCC 13127 chromosome, complete genomehypothetical protein3e-80300
NC_012997:4545875:4576598457659845784871890Teredinibacter turnerae T7901, complete genomehypothetical protein4e-80299
NC_014666:8488567:8505517850551785074931977Frankia sp. EuI1c chromosome, complete genomeProtein of unknown function DUF19982e-78293
NC_014365:2843126:2863143286314328649901848Desulfarculus baarsii DSM 2075 chromosome, complete genomeProtein of unknown function DUF19983e-76286
NC_014727:2036340:2052566205256620543351770Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,hypothetical protein5e-76285
NC_009648:5119271:5155897515589751577681872Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein4e-75282
NC_012731:600518:6421386421386440091872Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein5e-75282
NC_008554:4699577:4703431470343147052781848Syntrophobacter fumaroxidans MPOB, complete genomehypothetical protein7e-75282
NC_016048:2907702:2912735291273529145791845Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-74281
NC_011958:1031592:1039103103910310409231821Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein2e-74280
NC_006177:1422932:1441865144186514436821818Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein5e-74279
NC_012521:1:1250812508143911884Rhodococcus opacus B4 plasmid pROB02, complete sequencehypothetical protein5e-74279
NC_014479:3939183:3950782395078239525571776Bacillus subtilis subsp. spizizenii str. W23 chromosome, completehypothetical protein1e-73277
NC_007645:5801295:5828258582825858300931836Hahella chejuensis KCTC 2396, complete genomehypothetical protein8e-73275
NC_008786:1298817:1317909131790913197591851Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein2e-72274
NC_008782:2326439:2337936233793623397951860Acidovorax sp. JS42, complete genomehypothetical protein9e-72271
NC_009076:3564500:3577817357781735796881872Burkholderia pseudomallei 1106a chromosome I, complete sequencehypothetical protein1e-70268
NC_013526:835117:8386748386748405991926Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomehypothetical protein3e-70266
NC_017249:8483159:8503009850300985048591851Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-68258
NC_014828:1335154:1389566138956613914221857Ethanoligenens harbinense YUAN-3 chromosome, complete genomeProtein of unknown function DUF19981e-63244
NC_014924:2399524:2414752241475224165721821Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeProtein of unknown function DUF19984e-62239
NC_014391:1812500:1819627181962718214831857Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein3e-61236
NC_006350:845513:8896368896368914711836Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein4e-60233
NC_016943:3352413:3358293335829333600981806Blastococcus saxobsidens DD2, complete genomehypothetical protein2e-59230
NC_018750:6237875:6241732624173262436421911Streptomyces venezuelae ATCC 10712, complete genomehypothetical protein6e-59229
NC_008278:256427:2774412774412793661926Frankia alni ACN14a, complete genomeconserved hypothetical protein.6e-58225
NC_020126:2979959:3010077301007730119241848Myxococcus stipitatus DSM 14675, complete genomehypothetical protein4e-57223
NC_014210:3248526:3264638326463832665511914Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,Protein of unknown function DUF19984e-55216
NC_014820:1618606:1628194162819416299901797Cenarchaeum symbiosum A, complete genomehypothetical protein2e-54214
NC_004463:925140:9358679358679377141848Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-54214
NC_013235:508585:5163075163075181961890Nakamurella multipartita DSM 44233, complete genomehypothetical protein2e-54214
NC_013530:2492312:2511446251144625134582013Xylanimonas cellulosilytica DSM 15894, complete genomehypothetical protein4e-53209
NC_017082:3717939:3725617372561737274761860Bradyrhizobium sp. S23321, complete genomehypothetical protein9e-52205
NC_014830:3387479:3399693339969334017202028Intrasporangium calvum DSM 43043 chromosome, complete genomeProtein of unknown function DUF19983e-48193
NC_018581:2768743:2809075280907528111592085Gordonia sp. KTR9 chromosome, complete genomehypothetical protein7e-43175
NC_008146:861319:9000879000879021022016Mycobacterium sp. MCS, complete genomehypothetical protein1e-42174
NC_008705:868623:9087629087629108312070Mycobacterium sp. KMS, complete genomeconserved hypothetical protein2e-42174
NC_008578:2226778:2231921223192122337231803Acidothermus cellulolyticus 11B, complete genomehypothetical protein2e-39164
NC_013521:345308:3666363666363686542019Sanguibacter keddieii DSM 10542, complete genomeprotein of unknown function (DUF1998)2e-38161
NC_014721:2135500:2190075219007521918981824Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein7e-36152
NC_017068:1143515:1164531116453111666332103Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein1e-35151
NC_008697:202000:214667214667215497831Nocardioides sp. JS614 plasmid pNOCA01, complete sequencehypothetical protein2e-34147
NC_003901:357394:3663103663103681121803Methanosarcina mazei Go1, complete genomehypothetical protein8e-27122
NC_014761:74500:8532585325871991875Oceanithermus profundus DSM 14977 chromosome, complete genomehypothetical protein3e-24113
NC_012440:197728:2193772193772212331857Persephonella marina EX-H1, complete genomehypothetical protein7e-24112
NC_016114:1474000:1518936151893615208341899Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein1e-0965.1
NC_020388:1100759:1126595112659511284811887Natronomonas moolapensis 8.8.11 complete genomehypothetical protein2e-0964.3
NC_019964:3028469:3037486303748630393721887Halovivax ruber XH-70, complete genomeprotein of unknown function (DUF1998)8e-0962.8
NC_010571:1459363:1473692147369214755541863Opitutus terrae PB90-1, complete genomehypothetical protein2e-0861.2
NC_017322:1260526:1283994128399412862132220Sinorhizobium meliloti BL225C chromosome, complete genomehypothetical protein7e-0756.2