Pre_GI: BLASTP Hits

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Query: NC_008228:4696338:4703334 Pseudoalteromonas atlantica T6c, complete genome

Start: 4703334, End: 4704272, Length: 939

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008228:4696338:471091947109194711848930Pseudoalteromonas atlantica T6c, complete genomebeta-lactamase-like2e-144512
NC_014307:939601:939601939601940566966Ralstonia solanacearum CFBP2957 chromosome, complete genomearylsulfatase1e-36154
NC_014658:701020:721500721500722486987Methanothermus fervidus DSM 2088 chromosome, complete genomernase z2e-22107
NC_008271:140846:1602831602831614161134Rhodococcus sp. RHA1 plasmid pRHL3, complete sequencepossible hydrolase3e-21102
NC_011894:3319856:334064733406473341618972Methylobacterium nodulans ORS 2060, complete genomebeta-lactamase domain protein2e-20100
NC_015428:823420:823420823420824358939Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeribonuclease Z2e-1893.2
NC_018876:2628966:268405826840582684975918Methanolobus psychrophilus R15 chromosome, complete genomeribonuclease Z3e-1789.4
NC_015931:71361:114385114385115299915Pyrolobus fumarii 1A, complete genomeribonuclease Z4e-1789
NC_000917:829159:839164839164840084921Archaeoglobus fulgidus DSM 4304, complete genomeribonuclease Z2e-1686.7
NC_018876:168207:206512206512207288777Methanolobus psychrophilus R15 chromosome, complete genomebeta-lactamase-like protein3e-1685.9
NC_008533:592000:612662612662613591930Streptococcus pneumoniae D39, complete genomeribonuclease Z4e-1685.5
NC_010582:620400:638041638041638970930Streptococcus pneumoniae CGSP14, complete genomeribonuclease Z3e-1582.4
NC_014738:55782:742857428575199915Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,rnase z1e-1480.9
NC_010382:3350816:335258633525863353527942Lysinibacillus sphaericus C3-41, complete genomeribonuclease Z2e-1376.3
NC_015416:2692536:270730127073012708218918Methanosaeta concilii GP-6 chromosome, complete genomeribonuclease Z1e-1273.9
NC_000913:2373984:237963023796302380547918Escherichia coli K12, complete genomeribonuclease Z2e-1273.6
AC_000091:2379670:238627823862782387195918Escherichia coli W3110 DNA, complete genomebinuclear zinc phosphodiesterase2e-1273.6
NC_012759:2261416:226543522654352266352918Escherichia coli BW2952 chromosome, complete genomeribonuclease Z2e-1273.6
NC_014618:57707:677926779268742951Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein7e-1271.6
NC_014734:353159:359881359881360795915Paludibacter propionicigenes WB4 chromosome, complete genomeRNAse z1e-1170.5
NC_014033:1664500:168450316845031685417915Prevotella ruminicola 23 chromosome, complete genomeribonuclease Z4e-1065.9
NC_014374:193391:197848197848198729882Acidilobus saccharovorans 345-15 chromosome, complete genomeRibonuclease Z8e-1064.7
NC_011894:6220791:623168162316816232412732Methylobacterium nodulans ORS 2060, complete genomebeta-lactamase domain protein1e-0963.9
NC_003888:3138905:316057431605743161326753Streptomyces coelicolor A3(2), complete genomehypothetical protein5e-0962
NC_012781:751757:759098759098760009912Eubacterium rectale ATCC 33656, complete genomeribonuclease Z6e-0961.6
NC_015275:3594890:363242836324283633339912Clostridium lentocellum DSM 5427 chromosome, complete genomeribonuclease Z9e-0961.2
NC_014933:901897:907174907174908010837Bacteroides helcogenes P 36-108 chromosome, complete genomehypothetical protein2e-0859.7
NC_014666:7152782:715422171542217154967747Frankia sp. EuI1c chromosome, complete genomehypothetical protein5e-0858.9
NC_013771:1171251:119493611949361195904969Cyanobacterium UCYN-A, complete genomeRNAse Z9e-0857.8
NC_014387:719245:723324723324724244921Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeribonuclease Z2e-0757
NC_015518:1095879:112919611291961130062867Acidianus hospitalis W1 chromosome, complete genomeribonuclease Z4e-0755.8
NC_016582:10227196:1022719610227196102285241329Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein7e-0754.7