Pre_GI: BLASTP Hits

Some Help

Query: NC_008149:1221637:1239448 Yersinia pestis Nepal516, complete genome

Start: 1239448, End: 1239642, Length: 195

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003143:2895617:291339629133962913590195Yersinia pestis CO92, complete genomehypothetical protein6e-31132
NC_008150:2785830:279728927972892797483195Yersinia pestis Antiqua, complete genomehypothetical protein6e-31132
NC_004088:1291754:130954713095471309741195Yersinia pestis KIM, complete genomehypothetical protein6e-31132
NC_008800:3279468:328689432868943287088195Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-23107
NC_015224:1440283:145088614508861451080195Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-23107