Pre_GI: BLASTP Hits

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Query: NC_008146:5106775:5122517 Mycobacterium sp. MCS, complete genome

Start: 5122517, End: 5123026, Length: 510

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:5144433:516160051616005162109510Mycobacterium sp. KMS, complete genomethioesterase superfamily protein2e-93340
NC_009077:4810379:481037948103794810891513Mycobacterium sp. JLS, complete genomethioesterase superfamily protein2e-71267
NC_009338:4869700:487440048744004874912513Mycobacterium gilvum PYR-GCK chromosome, complete genomethioesterase superfamily protein1e-70265
NC_014814:1425500:142843214284321428947516Mycobacterium sp. Spyr1 chromosome, complete genomeprotein, possibly involved in aromatic compounds catabolism1e-70265
NC_008595:3914463:393414339341433934658516Mycobacterium avium 104, complete genomethioesterase family protein4e-60230
NC_018583:95388:131784131784132260477Gordonia sp. KTR9 plasmid pGKT3, complete sequencethioesterase superfamily protein6e-53206
NC_008699:2294361:231825023182502318822573Nocardioides sp. JS614, complete genomethioesterase superfamily protein3e-33140
NC_016887:1714664:175658817565881757130543Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein3e-30130
NC_009338:4869700:487805648780564878595540Mycobacterium gilvum PYR-GCK chromosome, complete genomethioesterase superfamily protein1e-24112
NC_012483:483425:510749510749511324576Acidobacterium capsulatum ATCC 51196, complete genomethioesterase family protein5e-1373.6
NC_013385:1064188:108346110834611083871411Ammonifex degensii KC4, complete genomethioesterase superfamily protein8e-1269.7
NC_016887:1714664:175069117506911750972282Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein3e-1167.8
NC_013216:4097056:410393141039314104335405Desulfotomaculum acetoxidans DSM 771, complete genomethioesterase superfamily protein3e-1064.7
NC_009454:2801808:281491728149172815348432Pelotomaculum thermopropionicum SI, complete genomehypothetical protein2e-0962
NC_015733:3923800:394370839437083944205498Pseudomonas putida S16 chromosome, complete genomehypothetical protein1e-0858.9
NC_012918:2569681:257140425714042571931528Geobacter sp. M21 chromosome, complete genomethioesterase superfamily protein1e-0756.2
NC_010336:1335558:134325713432571343745489Francisella philomiragia subsp. philomiragia ATCC 25017, completehypothetical protein3e-0754.7
NC_016937:1577334:159335215933521593840489Francisella tularensis subsp. tularensis TI0902 chromosome,hypothetical protein5e-0753.9
NC_007880:556334:560403560403560891489Francisella tularensis subsp. holarctica, complete genomehypothetical protein5e-0753.9
NC_008245:1577297:159331515933151593803489Francisella tularensis subsp. tularensis FSC 198, complete genomehypothetical protein5e-0753.9
NC_006570:1577491:159350915935091593997489Francisella tularensis subsp. tularensis Schu 4, complete genomehypothetical protein5e-0753.9
NC_008369:557941:564125564125564613489Francisella tularensis subsp. holarctica OSU18, complete genomehypothetical protein5e-0753.9
NC_010677:397629:404402404402404890489Francisella tularensis subsp. mediasiatica FSC147, complete genomethioesterase family protein5e-0753.9
NC_009257:386283:390372390372390860489Francisella tularensis subsp. tularensis WY96-3418 chromosome,thioesterase family protein5e-0753.9
NC_016933:1653241:166925916692591669747489Francisella tularensis TIGB03 chromosome, complete genomehypothetical protein5e-0753.9
NC_008601:1518136:152896115289611529449489Francisella tularensis subsp. novicida U112, complete genomeconserved hypothetical protein, Thioesterase superfamily5e-0753.5
NC_020541:1786500:181937118193711819865495Rhodanobacter sp. 2APBS1, complete genomehypothetical protein8e-0753.1
NC_010612:3813481:383147838314783831786309Mycobacterium marinum M, complete genomehypothetical protein1e-0652.8
NC_011146:2304475:232403923240392324566528Geobacter bemidjiensis Bem, complete genomethioesterase superfamily protein1e-0652.4
NC_014960:2858572:286256828625682863068501Anaerolinea thermophila UNI-1, complete genomehypothetical protein1e-0652.4
NC_011894:6888562:692096669209666921421456Methylobacterium nodulans ORS 2060, complete genomethioesterase superfamily protein1e-0652.4
NC_013740:1081454:110084111008411101242402Acidaminococcus fermentans DSM 20731, complete genomethioesterase superfamily protein4e-0650.8