Pre_GI: BLASTP Hits

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Query: NC_008146:1748026:1779000 Mycobacterium sp. MCS, complete genome

Start: 1779000, End: 1779509, Length: 510

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008146:1748026:177232417723241773034711Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit4e-92336
NC_009338:686932:691261691261691806546Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta7e-91332
NC_009077:1687304:171084117108411711350510Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit9e-91332
NC_009077:2308634:233977223397722340281510Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit9e-91332
NC_009077:2308634:233356623335662334075510Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-89328
NC_009338:555587:597217597217597726510Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-88323
NC_009077:1687304:171871617187161719126411Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-71268
NC_016604:3184855:321250332125033213021519Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase6e-41166
NC_009338:555587:565420565420565938519Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-40164
NC_008705:1790222:183420218342021834720519Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit2e-40164
NC_009077:1725683:176427717642771764795519Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit2e-40164
NC_014098:2971011:298169529816952982207513Bacillus tusciae DSM 2912 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase beta subunit3e-37154
NC_009338:630130:659657659657660199543Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-37154
NC_009338:555587:585973585973586515543Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-37154
NC_008146:1748026:180520618052061805748543Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-37154
NC_008726:549102:568557568557569099543Mycobacterium vanbaalenii PYR-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-37154
NC_008705:1790222:180823918082391808781543Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-37154
NC_009077:1725683:174370017437001744242543Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-37154
NC_014814:169374:186725186725187267543Mycobacterium sp. Spyr1 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase5e-37153
NC_014974:1076565:108904410890441089556513Thermus scotoductus SA-01 chromosome, complete genome3-phenylpropionate dioxygenase subunit beta2e-36151
NC_016604:3184855:319191231919123192454543Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase4e-35147
NC_010170:1551923:156165215616521562170519Bordetella petrii, complete genomeBiphenyl dioxygenase small subunit4e-32137
NC_014814:132404:144338144338144937600Mycobacterium sp. Spyr1 chromosome, complete genomephthalate 3,4-dioxygenase, beta subunit7e-30129
NC_009077:1687304:170002217000221700621600Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit7e-30129
NC_008726:494769:506675506675507271597Mycobacterium vanbaalenii PYR-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-29127
NC_009338:603663:620497620497621096600Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta6e-29126
NC_008705:1752180:176454617645461765142597Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit2e-28125
NC_008146:1748026:176039217603921760988597Mycobacterium sp. MCS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit2e-28125
NC_016604:3137694:315275531527553153318564Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase1e-28125
NC_009338:686932:703451703451704047597Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta3e-28124
NC_016947:1480282:148028214802821480869588Mycobacterium intracellulare MOTT-02 chromosome, complete genome3-phenylpropionate dioxygenase subunit beta1e-24112
NC_012521:148886:171604171604172167564Rhodococcus opacus B4 plasmid pROB02, complete sequencebenzene dioxygenase small subunit2e-23108
NC_010170:3944228:394901539490153949578564Bordetella petrii, complete genomechlorobenzene dioxygenase, small subunit of terminal oxygenase1e-22105
NC_009512:3251545:327106332710633271626564Pseudomonas putida F1, complete genomeToluene dioxygenase1e-21102
NC_011961:304158:327674327674328228555Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence3-phenylpropionate dioxygenase subunit beta (Digoxigenin subunit beta)2e-21102
NC_009077:4419084:443164844316484432247600Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit3e-21101
NC_017506:1:251792517925754576Marinobacter adhaerens HP15 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta2e-21101
NC_016947:1480282:150238215023821502927546Mycobacterium intracellulare MOTT-02 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta1e-2099
NC_009338:630130:646703646703647215513Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta1e-1892.4
NC_009338:555587:573019573019573531513Mycobacterium gilvum PYR-GCK chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta1e-1892.4
NC_009077:1725683:175668417566841757196513Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-1892.4
NC_008705:1790222:182660918266091827121513Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-1892.4
NC_016582:9050528:906109190610919061573483Streptomyces bingchenggensis BCW-1 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta5e-1890.1
NC_008726:4725389:473961847396184740181564Mycobacterium vanbaalenii PYR-1, complete genomeBenzene 1,2-dioxygenase7e-1889.7
NC_016604:3184855:320491632049163205428513Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase1e-1789
NC_014098:2332938:234438223443822344882501Bacillus tusciae DSM 2912 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase beta subunit2e-1788.2
NC_014814:169374:194290194290194844555Mycobacterium sp. Spyr1 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase7e-1786.7
NC_009338:630130:652080652080652634555Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta8e-1786.3
NC_009338:555587:578396578396578950555Mycobacterium gilvum PYR-GCK chromosome, complete genome3-phenylpropionate dioxygenase subunit beta8e-1786.3
NC_008726:549102:576122576122576676555Mycobacterium vanbaalenii PYR-1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit8e-1786.3
NC_008705:1790222:181580418158041816358555Mycobacterium sp. KMS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit8e-1786.3
NC_009077:1725683:175126517512651751819555Mycobacterium sp. JLS, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit8e-1786.3
NC_016604:3184855:319944731994473200004558Mycobacterium rhodesiae NBB3 chromosome, complete genomesmall subunit of phenylpropionate dioxygenase2e-1685.1
NC_009512:3282500:328607032860703286612543Pseudomonas putida F1, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit2e-1581.6
NC_015580:3252534:326749432674943268018525Novosphingobium sp. PP1Y, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta2e-1478.6
NC_015434:1313979:132035113203511320878528Verrucosispora maris AB-18-032 chromosome, complete genomep-cumate dioxygenase small subunit1e-1168.9
NC_008781:2611702:262216926221692622753585Polaromonas naphthalenivorans CJ2, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit4e-1063.9
NC_008782:3252092:326343132634313264015585Acidovorax sp. JS42, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-0962.4
NC_016147:2820232:283650328365032837018516Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative dioxygenase component subunit beta6e-0960.1
NC_021171:2019755:203256220325622033143582Bacillus sp. 1NLA3E, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta6e-0960.1
NC_007181:1856455:187801918780191878531513Sulfolobus acidocaldarius DSM 639, complete genomearomatic ring dioxygenase subunit B1e-0859.3
NC_017275:698854:715064715064715576513Sulfolobus islandicus HVE10/4 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta1e-0858.9
NC_015563:1951368:196159219615921962110519Delftia sp. Cs1-4 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta3e-0857.8
NC_013769:826933:833551833551834063513Sulfolobus islandicus L.D.8.5 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta4e-0857.4
NC_011740:1494796:151994015199401520425486Escherichia fergusonii ATCC 35469, complete genomebenzoate 1,2-dioxygenase beta subunit7e-0856.6
NC_015554:4002952:400756740075674008154588Alteromonas sp. SN2 chromosome, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta1e-0755.8
NC_008699:857837:870239870239870829591Nocardioides sp. JS614, complete genomearomatic-ring-hydroxylating dioxygenase, beta subunit1e-0755.8
NC_007492:3384077:340444434044443404929486Pseudomonas fluorescens PfO-1, complete genomeAromatic-ring-hydroxylating dioxygenase, beta subunit8e-0753.1
NC_011002:564654:564654564654565142489Burkholderia cenocepacia J2315 chromosome 3, complete sequencebenzoate 1,2-dioxygenase beta subunit2e-0652
NC_020209:1986503:199309619930961993572477Pseudomonas poae RE*1-1-14, complete genomearomatic-ring-hydroxylating dioxygenase subunit beta4e-0650.8
NC_010512:110932:127920127920128408489Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencebenzoate 1,2-dioxygenase, small subunit6e-0650.1
NC_015381:1705383:170488617048861705386501Burkholderia gladioli BSR3 chromosome 1, complete sequenceRing hydroxylating beta subunit family protein7e-0650.1