Pre_GI: BLASTP Hits

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Query: NC_008043:499399:514420 Silicibacter sp. TM1040 mega plasmid, complete sequence

Start: 514420, End: 515673, Length: 1254

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007435:1446916:1485572148557214868131242Burkholderia pseudomallei 1710b chromosome II, complete sequenceABC transporter, substrate-binding protein3e-101369
NC_009078:2718741:2757397275739727585961200Burkholderia pseudomallei 1106a chromosome II, complete sequenceABC transporter, carbohydrate uptake transporter-1 (CUT1) family, periplasmic carbohydrate-binding protein4e-101368
NC_013411:2739989:2761338276133827626631326Geobacillus sp. Y412MC61, complete genomeextracellular solute-binding protein family 12e-23110
NC_009328:1867971:1885183188518318865051323Geobacillus thermodenitrificans NG80-2 chromosome, complete genomesugar ABC transporter sugar-binding protein1e-22107
NC_013526:835117:8442878442878457741488Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 13e-21103
NC_014364:1263427:1278910127891012802081299Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-20100
NC_015690:7785875:7785875778587577872091335Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-2099
NC_014169:1909482:1922288192228819235621275Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 1 extracellular solute-binding protein9e-1891.7
NC_019970:929666:9492049492049505231320Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeABC-type sugar transport system, periplasmic component4e-1686.3
NC_016114:7252500:7259946725994672612531308Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeABC transporter substrate-binding protein5e-1685.9
NC_016582:8711199:8715519871551987168381320Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative extracellular solute-binding protein3e-1583.2
NC_015690:7334786:7334786733478673361141329Paenibacillus mucilaginosus KNP414 chromosome, complete genomefamily 1 extracellular solute-binding protein9e-1478.2
NC_008010:321561:3322443322443335061263Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceextracellular solute-binding protein, family 11e-1377.8
NC_010001:4168817:4172661417266141740161356Clostridium phytofermentans ISDg, complete genomeextracellular solute-binding protein family 11e-1274.7
NC_013172:3093467:3101736310173631030161281Brachybacterium faecium DSM 4810, complete genomeABC-type sugar transport system, periplasmic component6e-1272.4
NC_013093:2633000:2663250266325026645241275Actinosynnema mirum DSM 43827, complete genomeextracellular solute-binding protein family 11e-1171.2
NC_013526:105195:1229431229431243491407Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeextracellular solute-binding protein family 11e-1067.8
NC_009380:3734773:3742197374219737434471251Salinispora tropica CNB-440 chromosome, complete genomeextracellular solute-binding protein1e-1067.8
NC_014217:4550544:4569596456959645709001305Starkeya novella DSM 506 chromosome, complete genomeextracellular solute-binding protein family 14e-1066.6
NC_000854:1:2250622506239121407Aeropyrum pernix K1, complete genomeABC transporter, substrate binding protein4e-1066.2
NC_009033:1108236:1111092111109211125551464Staphylothermus marinus F1, complete genomeextracellular solute-binding protein, family 19e-1065.1
NC_012914:4238142:4261099426109942624451347Paenibacillus sp. JDR-2, complete genomeextracellular solute-binding protein family 11e-0965.1
NC_014622:653599:6574276574276587221296Paenibacillus polymyxa SC2 chromosome, complete genomemultiple sugar-binding transporter multiple sugar-binding protein2e-0963.9
NC_008261:1249595:1270941127094112722001260Clostridium perfringens ATCC 13124, complete genomesugar ABC transporter, sugar-binding protein2e-0963.5
NC_014364:3500041:3506794350679435080321239Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 17e-0962.4
NC_015588:1847500:1861534186153418627991266Isoptericola variabilis 225 chromosome, complete genomeextracellular solute-binding protein family 18e-0962
NC_014483:562594:5665565665565678511296Paenibacillus polymyxa E681 chromosome, complete genomeABC-type sugar transport system, periplasmic component1e-0861.2
NC_016641:2225779:2229650222965022310351386Paenibacillus terrae HPL-003 chromosome, complete genomesugar ABC transporter periplasmic protein2e-0860.8
NC_014364:815346:8153468153468166261281Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeextracellular solute-binding protein family 12e-0860.5
NC_013530:3204825:3236348323634832376701323Xylanimonas cellulosilytica DSM 15894, complete genomeextracellular solute-binding protein family 15e-0859.3
NC_016641:373623:3751463751463764831338Paenibacillus terrae HPL-003 chromosome, complete genomefamily 1 extracellular solute-binding protein6e-0858.9
NC_011653:1574415:1579050157905015803001251Thermosipho africanus TCF52B, complete genomelactose-binding protein8e-0858.5
NC_011899:1021672:1024430102443010257041275Halothermothrix orenii H 168, complete genomeextracellular solute-binding protein family 19e-0858.5
NC_013714:2477638:2490253249025324915241272Bifidobacterium dentium Bd1, complete genomeSolute binding protein of ABC transporter system1e-0758.2
NC_014618:586240:5922685922685935151248Enterobacter cloacae SCF1 chromosome, complete genomeextracellular solute-binding protein2e-0757.4
NC_016109:2938000:2945031294503129464221392Kitasatospora setae KM-6054, complete genomechitobiose ABC transporter substrate-binding protein2e-0757.4
NC_011886:3903343:3915675391567539170121338Arthrobacter chlorophenolicus A6, complete genomeextracellular solute-binding protein family 18e-0755.5
NC_008699:56500:6667666676679951320Nocardioides sp. JS614, complete genomeextracellular solute-binding protein, family 11e-0655.1
NC_015152:272500:2726852726852739591275Spirochaeta sp. Buddy chromosome, complete genomeextracellular solute-binding protein family 13e-0653.5
NC_014169:2407266:2413659241365924149871329Bifidobacterium longum subsp. longum JDM301 chromosome, completefamily 1 extracellular solute-binding protein4e-0653.1
NC_014656:1704101:1716280171628017176081329Bifidobacterium longum subsp. longum BBMN68 chromosome, completemale-type abc sugar transport system periplasmic component4e-0653.1
NC_016628:537137:5466405466405479141275Vibrio furnissii NCTC 11218 chromosome 2, complete sequencesugar transport system sugar-binding lipoprotein4e-0653.1
NC_012032:448161:4605724605724619181347Chloroflexus sp. Y-400-fl, complete genomeextracellular solute-binding protein family 14e-0653.1
NC_010175:448020:4604304604304617761347Chloroflexus aurantiacus J-10-fl, complete genomeextracellular solute-binding protein family 14e-0653.1
NC_004668:2762464:2781265278126527825451281Enterococcus faecalis V583, complete genomeABC transporter, substrate-binding protein5e-0652.8
NC_014246:1787154:1798378179837817996131236Mobiluncus curtisii ATCC 43063 chromosome, complete genomesugar ABC transporter substrate-binding protein5e-0652.8
NC_014828:1905479:1919665191966519209691305Ethanoligenens harbinense YUAN-3 chromosome, complete genomeextracellular solute-binding protein family 17e-0652.4
NC_013406:303218:3367583367583380501293Paenibacillus sp. Y412MC10 chromosome, complete genomefamily 1 extracellular solute-binding protein1e-0551.6