Pre_GI: BLASTP Hits

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Query: NC_007964:2762000:2773064 Nitrobacter hamburgensis X14, complete genome

Start: 2773064, End: 2773324, Length: 261

Host Lineage: Nitrobacter hamburgensis; Nitrobacter; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrobacter hamburgensis X14 was isolated from soil. Nitrite-oxidizing soil bacterium. Members of this genus are found in marine, freshwater, and terrestrial habitats, often in association with ammonia-oxidizing bacteria. These organisms oxidize nitrite, generated by the oxidation of ammonia, to nitrate and play an important role in the global nitrogen cycle. The enzyme involved in nitrite oxidation, nitrite oxidoreductase, can also reduce nitrate to nitrite in the absence of oxygen, allowing Nitrobacter sp. to grow anaerobically. Nitrobacter hamburgensis is commonly isolated from freshwater, soil, and sewage sludge. This organism has been used in biofilms to remove nitrogen from wastewater.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015259:1803266:181078218107821810967186Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, XRE family4e-21100
NC_010725:4035397:407959340795934079832240Methylobacterium populi BJ001, complete genometranscriptional regulator, XRE family1e-1065.1
NC_008542:197500:220256220256220585330Burkholderia cenocepacia HI2424 chromosome 1, complete sequencetranscriptional regulator, XRE family1e-0961.6
NC_016830:3869572:389216638921663892420255Pseudomonas fluorescens F113 chromosome, complete genometranscriptional xre family1e-0961.6
NC_014500:894136:905690905690905920231Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein2e-0961.2
NC_007651:72952:124305124305124691387Burkholderia thailandensis E264 chromosome I, complete sequencepossible transcriptional regulator, XRE family2e-0960.8
NC_013132:782846:785123785123785347225Chitinophaga pinensis DSM 2588, complete genometranscriptional regulator, XRE family3e-0960.5
NC_012660:2045398:210077121007712101025255Pseudomonas fluorescens SBW25 chromosome, complete genomeputative HTH-type regulatory protein4e-0960.1
NC_011000:2732330:278200927820092782338330Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein5e-0959.7
NC_009667:1934818:194392819439281944158231Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceXRE family transcriptional regulator6e-0959.3
NC_014311:1507945:151246115124611512742282Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator2e-0858.2
NC_014618:1103239:112464711246471124898252Enterobacter cloacae SCF1 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0857.4
NC_014500:894136:905379905379905648270Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein6e-0856.2
NC_005085:1096000:110426611042661104529264Chromobacterium violaceum ATCC 12472, complete genomeprobable transcriptional regulator9e-0855.5
NC_012792:627500:637235637235637438204Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family1e-0755.5
NC_014500:1862000:190350619035061903814309Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein1e-0755.1
NC_003047:536151:546632546632546901270Sinorhizobium meliloti 1021, complete genomeHYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN3e-0754.3
NC_007508:2941889:295324729532472953522276Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein2e-0754.3
NC_015422:3184823:320448032044803204743264Alicycliphilus denitrificans K601 chromosome, complete genomehelix-turn-helix domain-containing protein3e-0753.9
NC_017249:18493:345743457434855282Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-0753.9
NC_004463:18497:345793457934860282Bradyrhizobium japonicum USDA 110, complete genomeprobable transcriptional regulator3e-0753.9
NC_014158:1479313:150236015023601502611252Tsukamurella paurometabola DSM 20162 chromosome, complete genometranscriptional regulator, XRE family4e-0753.5
NC_016616:2997348:300945030094503009686237Dechlorosoma suillum PS chromosome, complete genomeputative transcriptional regulator4e-0753.5
NC_016002:1975000:200038420003842000629246Pseudogulbenkiania sp. NH8B, complete genomeputative transcriptional regulator3e-0753.5
NC_011667:1:118811881436249Thauera sp. MZ1T plasmid pTha01, complete sequencehelix-turn-helix domain protein6e-0752.8
NC_015590:145353:152549152549152821273Sinorhizobium meliloti AK83 chromosome 1, complete sequencehelix-turn-helix domain-containing protein6e-0752.8
NC_010571:4483500:448599644859964486226231Opitutus terrae PB90-1, complete genometranscriptional regulator, XRE family7e-0752.4
NC_009720:622262:650729650729650977249Xanthobacter autotrophicus Py2, complete genomeXRE family transcriptional regulator9e-0752.4
NC_012808:58701:745447454474837294Methylobacterium extorquens AM1, complete genomeTranscriptional regulator, XRE family9e-0752.4
NC_014618:1103239:112495011249501125180231Enterobacter cloacae SCF1 chromosome, complete genomehelix-turn-helix domain-containing protein2e-0651.6
NC_006569:69939:809618096181179219Silicibacter pomeroyi DSS-3 megaplasmid, complete sequenceDNA-binding protein, putative1e-0651.6
NC_008322:373531:373304373304373534231Shewanella sp. MR-7, complete genometranscriptional regulator, XRE family1e-0651.6
NC_010120:1065833:107078010707801071133354Neisseria meningitidis 053442, complete genometranscriptional regulator2e-0651.2
NC_018868:619113:654559654559654795237Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeCro/CI family transcriptional regulator2e-0650.8
NC_015675:6423000:642730664273066427524219Mesorhizobium opportunistum WSM2075 chromosome, complete genomeXRE family transcriptional regulator2e-0650.8
NC_014923:5868000:587263558726355872853219Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehelix-turn-helix domain protein2e-0650.8
NC_019973:5797000:580159558015955801813219Mesorhizobium australicum WSM2073, complete genomeputative transcriptional regulator2e-0650.8
NC_015677:285896:300214300214300459246Ramlibacter tataouinensis TTB310 chromosome, complete genomeXRE family transcriptional regulator2e-0650.8
NC_007650:2429307:245966124596612459864204Burkholderia thailandensis E264 chromosome II, complete sequenceDNA-binding protein3e-0650.4
NC_006351:520500:521079521079521324246Burkholderia pseudomallei K96243 chromosome 2, complete sequenceDNA-binding regulatory protein3e-0650.4
NC_007626:506532:513201513201513431231Magnetospirillum magneticum AMB-1, complete genomePredicted transcriptional regulator4e-0650.4
NC_020829:940692:947744947744947956213Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein4e-0650.1
NC_014217:2987450:299692129969212997139219Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, XRE family4e-0650.1
NC_013441:1487058:151371615137161513997282Gordonia bronchialis DSM 43247, complete genomehelix-turn-helix domain protein6e-0649.3
NC_015136:1301576:130300013030001303254255Burkholderia sp. CCGE1001 chromosome 1, complete sequencehelix-turn-helix domain-containing protein7e-0649.3