Pre_GI: BLASTP Hits

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Query: NC_007953:938346:956615 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 956615, End: 957532, Length: 918

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009718:203998:213536213536214363828Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein2e-51202
NC_016751:469289:476218476218477036819Marinitoga piezophila KA3 chromosome, complete genomehypothetical protein5e-50198
NC_009633:337706:356371356371357183813Alkaliphilus metalliredigens QYMF chromosome, complete genomehypothetical protein4e-46185
NC_010003:1126800:115198511519851152806822Petrotoga mobilis SJ95, complete genomeprotein of unknown function DUF8495e-44178
NC_009616:183772:198192198192199010819Thermosipho melanesiensis BI429 chromosome, complete genomehypothetical protein6e-43174
NC_020291:2487575:249940924994092500245837Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein8e-37154
NC_003454:339345:359705359705360523819Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeHypothetical cytosolic protein3e-36152
NC_010718:1959517:197313819731381974007870Natranaerobius thermophilus JW/NM-WN-LF, complete genome3-keto-5-aminohexanoate cleavage enzyme3e-35149
NC_008095:5377000:538789853878985388725828Myxococcus xanthus DK 1622, complete genomehypothetical protein1e-32140
NC_007948:360199:375107375107375985879Polaromonas sp. JS666, complete genomeprotein of unknown function DUF8496e-32138
NC_009328:2808897:281860128186012819434834Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein2e-29129
NC_004461:205068:210026210026210928903Staphylococcus epidermidis ATCC 12228, complete genomehypothetical protein3e-29129
NC_018000:1914945:192305619230561923931876Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein3e-28125
NC_010623:188143:211939211939212868930Burkholderia phymatum STM815 chromosome 2, complete sequenceprotein of unknown function DUF8492e-27123
NC_010552:2131021:213102121310212131950930Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function DUF8491e-26120
NC_010501:4989455:500108250010825002020939Pseudomonas putida W619, complete genomeprotein of unknown function DUF8491e-25117
NC_010162:2406976:242131224213122422250939Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-25115
NC_015160:3749636:376601937660193766846828Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein7e-25114
NC_008699:4443000:446702944670294467940912Nocardioides sp. JS614, complete genomeprotein of unknown function DUF8498e-25114
NC_014006:1365207:137017513701751371101927Sphingobium japonicum UT26S chromosome 1, complete genomehypothetical protein1e-22107
NC_009921:5609770:563986256398625640761900Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF8499e-21100
NC_015136:1101725:112883111288311129769939Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein3e-1996.3
NC_014532:2664139:267974926797492680681933Halomonas elongata DSM 2581, complete genomeprotein of unknown function DUF8496e-1788.2
NC_014539:743523:787171787171788103933Burkholderia sp. CCGE1003 chromosome 1, complete sequencehypothetical protein6e-1685.1
NC_007953:1088933:109345210934521094384933Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein5e-1582
NC_010501:1868888:189060818906081891534927Pseudomonas putida W619, complete genomeprotein of unknown function DUF8499e-1477.8
NC_010505:5035668:504182950418295042656828Methylobacterium radiotolerans JCM 2831, complete genomeprotein of unknown function DUF8493e-1375.9
NC_010511:6067000:607535660753566075742387Methylobacterium sp. 4-46 chromosome, complete genomehypothetical protein4e-0755.8