Pre_GI: BLASTP Hits

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Query: NC_007953:938346:938346 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 938346, End: 939341, Length: 996

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015381:4070968:409097440909744091966993Burkholderia gladioli BSR3 chromosome 1, complete sequencefumarylacetoacetate hydrolase family protein5e-69261
NC_007508:4283750:431363143136314314620990Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomefumarylacetoacetate hydrolase family protein6e-69261
NC_010717:4626178:464931146493114650306996Xanthomonas oryzae pv. oryzae PXO99A, complete genomefumarylacetoacetate hydrolase6e-69261
NC_015138:693865:6938656938656948751011Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completefumarylacetoacetate (FAA) hydrolase5e-67254
NC_010688:4235528:426342542634254264414990Xanthomonas campestris pv. campestris, complete genomeFumarylacetoacetate hydrolase family protein2e-66253
NC_006513:1949751:1967480196748019685081029Azoarcus sp. EbN1, complete genomepotential fumarylacetoacetate hydrolase (extradiol catechol pathway)1e-64247
NC_008148:2231045:224789622478962248858963Rubrobacter xylanophilus DSM 9941, complete genomefumarylacetoacetate (FAA) hydrolase7e-1271.6
NC_007181:1963887:198167519816751982622948Sulfolobus acidocaldarius DSM 639, complete genomefumarylacetoacetate (FAA) hydrolase8e-1064.7
NC_007347:1215358:122882012288201229689870Ralstonia eutropha JMP134 chromosome 1, complete sequence5-carboxymethyl-2-hydroxymuconate delta-isomerase7e-0961.6
NC_017506:1:420754207543064990Marinobacter adhaerens HP15 chromosome, complete genomefumarylacetoacetate (FAA) hydrolase2e-0860.1
NC_010515:1375091:140395414039541404826873Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence5-carboxymethyl-2-hydroxymuconate Delta-isomerase5e-0858.9
NC_007802:2026500:204460320446032045520918Jannaschia sp. CCS1, complete genomefumarylacetoacetate (FAA) hydrolase2e-0757
NC_014532:2989185:299594229959422996784843Halomonas elongata DSM 2581, complete genomefumarylacetoacetate hydrolase family protein3e-0756.2
NC_010557:316000:325745325745326638894Burkholderia ambifaria MC40-6 chromosome 3, complete sequence5-carboxymethyl-2-hydroxymuconate Delta-isomerase5e-0755.5
NC_008061:2153495:215875421587542159626873Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase5e-0755.5
NC_015514:3351052:3353187335318733541941008Cellulomonas fimi ATCC 484 chromosome, complete genomefumarylacetoacetate (FAA) hydrolase5e-0755.5
NC_008545:115292:130099130099130971873Burkholderia cenocepacia HI2424 plasmid 1, complete sequence5-carboxymethyl-2-hydroxymuconate delta-isomerase9e-0754.7