Pre_GI: BLASTP Hits

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Query: NC_007953:1088933:1097573 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 1097573, End: 1099372, Length: 1800

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014831:1843835:1862632186263218643651734Thermaerobacter marianensis DSM 12885 chromosome, complete genome5-oxoprolinase (ATP-hydrolyzing)2e-96353
NC_013966:399215:3992153992154009661752Haloferax volcanii DS2 plasmid pHV4, complete sequenceN-methylhydantoinase (ATP-hydrolyzing) B6e-88325
NC_018532:166468:1685091685091701821674Arthrobacter sp. Rue61a plasmid p232, complete sequenceN-methylhydantoinase B/ oxoprolinase HyuB4e-83309
NC_008541:4066294:4093265409326540949381674Arthrobacter sp. FB24 chromosome 1, complete sequence5-oxoprolinase (ATP-hydrolyzing)7e-83308
NC_011420:3822765:3845602384560238472841683Rhodospirillum centenum SW, complete genomeN-methylhydantoinase B (HuyB-1)2e-80300
NC_013524:1207845:1218887121888712206441758Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genome5-oxoprolinase (ATP-hydrolyzing)1e-79297
NC_006510:2910000:2915852291585229175881737Geobacillus kaustophilus HTA426, complete genomeN-methylhydantoinase B (ATP-hydrolyzing)3e-79296
NC_011144:2770842:2781732278173227834021671Phenylobacterium zucineum HLK1, complete genome5-oxoprolinase (ATP-hydrolyzing)2e-76286
NC_007181:1856455:1858503185850318602271725Sulfolobus acidocaldarius DSM 639, complete genomehypothetical protein5e-75282
NC_017273:352150:3677613677613694161656Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete5-oxoprolinase5e-69262
NC_018000:1914945:1930437193043719321461710Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein2e-64247
NC_000918:1353310:1354860135486013564251566Aquifex aeolicus VF5, complete genomeN-methylhydantoinase B2e-62240
NC_015944:10500:3092130921325491629Haloarcula hispanica ATCC 33960 plasmid pHH400, complete sequenceN-methylhydantoinase B5e-61236
NC_013947:5546315:5544612554461255463181707Stackebrandtia nassauensis DSM 44728 chromosome, complete genome5-oxoprolinase (ATP-hydrolyzing)1e-60234
NC_012440:1405879:1407659140765914092331575Persephonella marina EX-H1, complete genome5-oxoprolinase (5-oxo-L-prolinase) (Pyroglutamase) (5-OPase)8e-60231
NC_006395:161455:1634461634461650741629Haloarcula marismortui ATCC 43049 plasmid pNG700, completeN-methylhydantoinase B2e-58227
NC_017273:352150:3694553694553710291575Thermus thermophilus SG0.5JP17-16 plasmid pTHTHE1601, complete5-oxoprolinase3e-58226
NC_014006:1365207:1378567137856713798801314Sphingobium japonicum UT26S chromosome 1, complete genomeN-methylhydantoinase B1e-57224
NC_014299:218252:2419942419942438021809Halalkalicoccus jeotgali B3 plasmid 2, complete sequence5-oxoprolinase (ATP-hydrolyzing)3e-57223
NC_014916:22644:3167531675334681794Geobacillus sp. Y412MC52 plasmid pGYMC5201, complete sequence5-oxoprolinase (ATP-hydrolyzing)7e-54212
NC_013412:33834:4326443264450571794Geobacillus sp. Y412MC61 plasmid pGYMC6101, complete sequence5-oxoprolinase (ATP-hydrolyzing)7e-54212
NC_013923:363500:3635653635653656102046Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequence5-oxoprolinase (ATP-hydrolyzing)1e-52207
NC_008148:1711679:1717696171769617195941899Rubrobacter xylanophilus DSM 9941, complete genome5-oxoprolinase (ATP-hydrolyzing)4e-52206
NC_014298:310964:3135743135743154541881Halalkalicoccus jeotgali B3 plasmid 1, complete sequence5-oxoprolinase (ATP-hydrolyzing)2e-51204
NC_002754:1811500:1825283182528318268151533Sulfolobus solfataricus P2, complete genomeN-methyl hydantoinase B (hyuB-2)3e-51203
NC_012589:783704:7934967934967950281533Sulfolobus islandicus L.S.2.15, complete genome5-oxoprolinase (ATP-hydrolyzing)4e-50199
NC_011144:2674242:2684456268445626861921737Phenylobacterium zucineum HLK1, complete genomeN-methylhydantoinase B/acetone carboxylase, alpha subunit5e-50199
NC_012623:1691759:1698813169881317003451533Sulfolobus islandicus Y.N.15.51 chromosome, complete genome5-oxoprolinase3e-49196
NC_003065:27163:6714767147691021956Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehydantoin utilization protein B6e-48192
NC_003308:1:3374433744356991956Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehydantoin utilization protein6e-48192
NC_014006:1862000:1887301188730118890731773Sphingobium japonicum UT26S chromosome 1, complete genomeN-methylhydantoinase B2e-47191
NC_015312:1220500:1227455122745512294612007Pseudonocardia dioxanivorans CB1190 chromosome, complete genome5-oxoprolinase7e-47189
NC_010676:2793237:2823288282328828250361749Burkholderia phytofirmans PsJN chromosome 2, complete sequence5-oxoprolinase (ATP-hydrolyzing)3e-46186
NC_012982:1569426:1581828158182815837051878Hirschia baltica ATCC 49814, complete genome5-oxoprolinase (ATP-hydrolyzing)6e-46186
NC_015591:1161007:1172675117267511743151641Sinorhizobium meliloti AK83 chromosome 3, complete sequence5-oxoprolinase1e-45184
NC_014910:1912552:1924725192472519267041980Alicycliphilus denitrificans BC chromosome, complete genome5-oxoprolinase (ATP-hydrolyzing)2e-45184
NC_015458:2441435:2448512244851224505332022Pusillimonas sp. T7-7 chromosome, complete genomehydantoin utilization protein B3e-44180
NC_002754:2667322:2677189267718926787301542Sulfolobus solfataricus P2, complete genomeN-methylhydantoinase B (hyuB-3)9e-42172
NC_014253:933261:9355389355389392003663Methanohalobium evestigatum Z-7303 chromosome, complete genome5-oxoprolinase5e-41169
NC_009440:1045882:1058857105885710603891533Metallosphaera sedula DSM 5348 chromosome, complete genome5-oxoprolinase6e-40166
NC_020453:1025891:1039642103964210414741833Agromonas oligotrophica S58 DNA, complete genomehypothetical protein1e-39164
NC_018876:1551155:1563576156357615672233648Methanolobus psychrophilus R15 chromosome, complete genome5-oxoprolinase (ATP-hydrolyzing)2e-39164
NC_007955:2281070:2285245228524522888653621Methanococcoides burtonii DSM 6242, complete genome5-oxoprolinase (ATP-hydrolyzing)3e-38160
NC_000911:3075896:3084677308467730884353759Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-37158
NC_013769:2335062:2353703235370323552411539Sulfolobus islandicus L.D.8.5 chromosome, complete genome5-oxoprolinase1e-37158
NC_017039:3073724:3082505308250530862633759Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-37158
NC_017052:3073713:3082494308249430862523759Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-37158
NC_017277:3083494:3083494308349430872523759Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-37158
NC_012589:2351811:2370630237063023721681539Sulfolobus islandicus L.S.2.15, complete genome5-oxoprolinase (ATP-hydrolyzing)2e-37157
NC_006270:1936952:1936952193695219386911740Bacillus licheniformis ATCC 14580, complete genomeHydantoin Utilization protein B6e-37155
NC_006322:1932847:1937798193779819395371740Bacillus licheniformis ATCC 14580, complete genomehypothetical protein6e-37155
NC_021171:2019755:2025814202581420275831770Bacillus sp. 1NLA3E, complete genome5-oxoprolinase6e-37155
NC_010525:421769:4237154237154252591545Thermoproteus neutrophilus V24Sta, complete genome5-oxoprolinase (ATP-hydrolyzing)7e-37155
NC_015676:1736375:1736375173637517400193645Methanosalsum zhilinae DSM 4017 chromosome, complete genome5-oxoprolinase3e-36153
NC_006677:215466:2353702353702369381569Gluconobacter oxydans 621H, complete genomeN-methylhydantoinase B1e-29132
NC_007513:1311957:1311957131195713156523696Synechococcus sp. CC9902, complete genome5-oxoprolinase (ATP-hydrolyzing)4e-29130
NC_008820:1766973:1768617176861717722913675Prochlorococcus marinus str. MIT 9303, complete genomeHydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase4e-29130
NC_015703:4417342:4434480443448044382203741Runella slithyformis DSM 19594 chromosome, complete genome5-oxoprolinase3e-28127
NC_003911:1791878:1806320180632018079691650Silicibacter pomeroyi DSS-3, complete genomehydantoinase/oxoprolinase family protein8e-28125
NC_008314:2744553:2755733275573327594613729Ralstonia eutropha H16 chromosome 2, complete sequenceHydantoinase/oxoprolinase containing both A and B domains1e-27125
NC_021184:3912805:3926082392608239279471866Desulfotomaculum gibsoniae DSM 7213, complete genomeN-methylhydantoinase B/acetone carboxylase, alpha subunit4e-27123
NC_015976:2064387:2064387206438720664022016Sphingobium sp. SYK-6, complete genomeputative hydantoinase B2e-25118
NC_008319:1950889:1970118197011819738223705Synechococcus sp. CC9311, complete genomeHydantoinase/oxoprolinase:Hydantoinase B/oxoprolinase8e-24112
NC_007516:1439537:1467036146703614706833648Synechococcus sp. CC9605, complete genome5-oxoprolinase (ATP-hydrolyzing)2e-22107
NC_006270:1936952:1935477193547719369551479Bacillus licheniformis ATCC 14580, complete genomeN-methylhydantoinase B3e-1687
NC_006322:1932847:1936323193632319378011479Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-1687
NC_014098:1114076:1128383112838311306202238Bacillus tusciae DSM 2912 chromosome, complete genomeHydantoinase B/oxoprolinase5e-1479.7
NC_006513:1379735:1414604141460414166582055Azoarcus sp. EbN1, complete genomepossible subunit of acetophenone carboxylase6e-1376.3
NC_008148:1859888:1869819186981918718792061Rubrobacter xylanophilus DSM 9941, complete genomeHydantoinase B/oxoprolinase2e-1171.2
NC_015422:3513689:3562811356281135651352325Alicycliphilus denitrificans K601 chromosome, complete genomeHydantoinase B/oxoprolinase1e-1068.9
NC_021171:2697398:2703513270351327057832271Bacillus sp. 1NLA3E, complete genomehydantoinase B/oxoprolinase3e-0963.9
NC_014006:1365207:137656013765601376940381Sphingobium japonicum UT26S chromosome 1, complete genomeN-methylhydantoinase B2e-0861.2