Pre_GI: BLASTP Hits

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Query: NC_007952:3196085:3221085 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3221085, End: 3222383, Length: 1299

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4565471456547145667661296Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein0727
NC_009439:3770282:3780095378009537813901296Pseudomonas mendocina ymp, complete genomehypothetical protein0716
NC_008463:2467219:2488133248813324894281296Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein0711
NC_010002:5691968:5702668570266857039721305Delftia acidovorans SPH-1, complete genomehypothetical protein0692
NC_016010:1822212:1844940184494018462381299Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein0689
NC_014910:1200605:1215217121521712165301314Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein0687
NC_012918:1444333:1455322145532214566711350Geobacter sp. M21 chromosome, complete genomehypothetical protein0642
NC_009434:3611738:3747709374770937488751167Pseudomonas stutzeri A1501, complete genomebiotin carboxylase0642
NC_019673:6259229:6257910625791062592321323Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein3e-168591
NC_014217:2020737:2032636203263620339581323Starkeya novella DSM 506 chromosome, complete genomehypothetical protein3e-163575
NC_015580:1584078:1595958159595815972621305Novosphingobium sp. PP1Y, complete genomehypothetical protein4e-162571
NC_008435:2658986:2688888268888826902011314Rhodopseudomonas palustris BisA53, complete genomehypothetical protein5e-154544
NC_017047:2042346:2053677205367720549841308Rahnella aquatilis HX2 chromosome, complete genomebiotin carboxylase1e-153543
NC_016612:28451:4281242812441281317Klebsiella oxytoca KCTC 1686 chromosome, complete genomebiotin carboxylase3e-153541
NC_007493:1929000:1938711193871119399821272Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencehypothetical protein4e-151534
NC_006370:1810842:1828517182851718297131197Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein7e-138490
NC_007333:39579:7412374123754541332Thermobifida fusca YX, complete genomehypothetical protein5e-130464
NC_007907:761486:7834637834637848061344Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-99362
NC_015172:850802:8525368525368538641329Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein4e-91335
NC_008639:2545107:2554404255440425557171314Chlorobium phaeobacteroides DSM 266, complete genomehypothetical protein4e-87322
NC_016887:1949927:1977092197709219784051314Nocardia cyriacigeorgica GUH-2, complete genomeputative ATP/GTP binding protein1e-21104
NC_003888:7337453:7372859737285973742081350Streptomyces coelicolor A3(2), complete genomeATP/GTP binding protein5e-21102
NC_010572:1872840:1897387189738718987151329Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ATP/GTP-binding protein6e-21102
NC_014148:3959960:3981418398141839827401323Planctomyces limnophilus DSM 3776 chromosome, complete genomeputative ATP/GTP binding protein4e-1996.3
NC_009338:3359500:3389067338906733903411275Mycobacterium gilvum PYR-GCK chromosome, complete genomeATP/GTP binding protein2e-1894.4
NC_013159:502928:5273945273945287161323Saccharomonospora viridis DSM 43017, complete genomehypothetical protein2e-1894
NC_013440:1624561:1624561162456116259131353Haliangium ochraceum DSM 14365, complete genomeputative ATP/GTP binding protein5e-1892.8
NC_007333:810381:8271898271898285141326Thermobifida fusca YX, complete genomeputative ATP/GTP binding protein5e-1892.8
NC_007645:3581114:3589353358935335906721320Hahella chejuensis KCTC 2396, complete genomeMethyl-accepting chemotaxis protein1e-1791.3
NC_013440:811780:8117808117808131321353Haliangium ochraceum DSM 14365, complete genomeputative ATP/GTP binding protein2e-1790.5
NC_013440:1580802:1579471157947115808051335Haliangium ochraceum DSM 14365, complete genomemethyl-accepting chemotaxis protein3e-1790.1
NC_008757:151862:1728171728171741271311Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completemethyl-accepting chemotaxis protein1e-1687.8
NC_011891:1278199:1297607129760712989321326Anaeromyxobacter dehalogenans 2CP-1, complete genomeputative ATP/GTP binding protein2e-1687.4
NC_013194:3861409:3871682387168238730011320Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completemethyl-accepting chemotaxis protein2e-1377
NC_013510:1703464:1713110171311017144351326Thermomonospora curvata DSM 43183, complete genomemethyl-accepting chemotaxis protein4e-1376.3
NC_009142:5698100:5716374571637457176301257Saccharopolyspora erythraea NRRL 2338, complete genomeATP/GTP binding protein6e-1168.9
NC_019942:1078837:1099273109927311005021230Aciduliprofundum sp. MAR08-339, complete genomeProtein of unknown function (DUF2791)1e-1067.8
NC_011145:4430501:4449771444977144510121242Anaeromyxobacter sp. K, complete genomehypothetical protein2e-1067.4
NC_014910:755192:764797764797765249453Alicycliphilus denitrificans BC chromosome, complete genome2e-0654.3