Pre_GI: BLASTP Hits

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Query: NC_007952:3196085:3208056 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3208056, End: 3210419, Length: 2364

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007355:729498:7294987294987313331836Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein7e-1996.7
NC_017030:3017802:3025199302519930278022604Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-1791.3
NC_010162:8528116:8536406853640685383011896Sorangium cellulosum 'So ce 56', complete genomeP-loop ATPase3e-1687.8
NC_009338:3029507:3046061304606130480762016Mycobacterium gilvum PYR-GCK chromosome, complete genomeKAP P-loop domain-containing protein1e-1379.3
NC_011662:1017933:1026772102677210287151944Thauera sp. MZ1T, complete genomeKAP P-loop domain protein4e-1273.9
NC_010322:5349000:5382289538228953841601872Pseudomonas putida GB-1 chromosome, complete genomeKAP P-loop domain-containing protein6e-1273.6
NC_010337:98974:1103791103791122981920Heliobacterium modesticaldum Ice1, complete genomekap p-loop8e-1273.2
NC_020181:5130513:5147323514732351492001878Enterobacter aerogenes EA1509E, complete genomePhage T7 exclusion protein3e-1171.2
NC_008347:2515921:2523066252306625248711806Maricaulis maris MCS10, complete genomeKAP P-loop domain protein3e-1171.2
NC_008611:3579500:3587912358791235895371626Mycobacterium ulcerans Agy99, complete genomeP-loop ATPase3e-1171.2
NC_020133:2421965:2433646243364624353731728Mycobacterium liflandii 128FXT, complete genomeP-loop ATPase4e-1170.9
NC_012997:817553:8348548348548381113258Teredinibacter turnerae T7901, complete genomeKAP family P-loop domain protein4e-1170.9
NC_007086:2887875:2956010295601029578631854Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein4e-1170.5
NC_007912:4579873:4590155459015545926472493Saccharophagus degradans 2-40, complete genomePutative oxygen-independent coproporphyrinogen III oxidase9e-1169.7
NC_011283:1178500:1189580118958011914571878Klebsiella pneumoniae 342 chromosome, complete genomeKAP family P-loop domain-containing protein1e-1069.3
NC_013194:1040197:1048741104874110506871947Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeKAP P-loop domain protein3e-1067.8
NC_015410:3093465:3135543313554331375071965Pseudomonas mendocina NK-01 chromosome, complete genomekap P-loop domain-containing protein6e-1066.6
NC_006582:4256915:4267499426749942693251827Bacillus clausii KSM-K16, complete genomehypothetical protein1e-0966.2
NC_003306:22228:2222822228241261899Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein5e-0963.5
NC_003064:22535:2253522535244331899Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein5e-0963.5
NC_016609:4834378:4863175486317548653372163Niastella koreensis GR20-10 chromosome, complete genomeKAP P-loop domain-containing protein1e-0862.8
NC_010510:409469:4094694094694112441776Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeKAP P-loop domain protein2e-0862
NC_008061:190287:2107852107852126711887Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceKAP P-loop2e-0861.6
NC_010515:2111691:2133783213378321356691887Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceKAP P-loop domain protein2e-0861.6
NC_009792:3245368:3269805326980532715801776Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-0861.2
NC_019673:2051363:2100891210089121026631773Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein5e-0860.5
NC_007973:2348481:2365944236594423678121869Ralstonia metallidurans CH34 chromosome 1, complete sequenceKAP P-loop2e-0758.5
NC_015690:1186545:1234984123498412370592076Paenibacillus mucilaginosus KNP414 chromosome, complete genomePifA3e-0757.8
NC_010162:5651746:5653160565316056570803921Sorangium cellulosum 'So ce 56', complete genomehypothetical protein1e-0655.8