Pre_GI: BLASTP Hits

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Query: NC_007951:2087385:2110731 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2110731, End: 2110835, Length: 105

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014394:1325616:1333782133378213350351254Gallionella capsiferriformans ES-2 chromosome, complete genometransposase mutator type3e-1063.9
NC_010529:296500:315512315512315970459Cupriavidus taiwanensis plasmid pRALTA, complete sequence3e-0753.9
NC_009075:1638789:164289516428951643110216Burkholderia pseudomallei 668 chromosome II, complete sequencetransposase3e-0753.9
NC_011992:3550566:3560780356078035620061227Acidovorax ebreus TPSY, complete genometransposase mutator type4e-0753.5
NC_011992:3375929:3383302338330233845281227Acidovorax ebreus TPSY, complete genometransposase mutator type4e-0753.5
NC_005773:4028500:403222140322214032904684Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase, truncated6e-0753.1
NC_015222:1749553:1753427175342717546561230Nitrosomonas sp. AL212 chromosome, complete genometransposase mutator type7e-0752.8
NC_005773:5734733:573787857378785738765888Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase, truncated6e-0752.8
NC_009656:6224221:6231219623121962324451227Pseudomonas aeruginosa PA7 chromosome, complete genometransposase mutator family protein8e-0752.4
NC_009656:3127240:3175228317522831764541227Pseudomonas aeruginosa PA7 chromosome, complete genometransposase mutator family protein8e-0752.4
NC_005773:2177184:2178354217835421795231170Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-0752.4
NC_005773:5310339:5323901532390153249801080Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase, truncated1e-0652.4
NC_005773:106000:1367141367141379731260Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase1e-0652
NC_014733:1073540:1082471108247110836881218Methylovorus sp. MP688 chromosome, complete genometransposase mutator family protein1e-0652
NC_005773:1675793:1683590168359016848491260Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase1e-0652
NC_005773:1675793:168787216878721688492621Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-0651.6
NC_005773:4539751:4541559454155945428181260Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase1e-0651.6
NC_005773:2177184:2187741218774121890001260Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH02, ISPsy18, transposase1e-0651.6
NC_005773:3220500:3239719323971932409781260Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase2e-0651.2
NC_005773:1851116:1851116185111618523751260Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase2e-0651.2
NC_005773:3851433:3855582385558238568411260Pseudomonas syringae pv. phaseolicola 1448A, complete genomeISPsy18, transposase2e-0651.2
NC_007275:1:1120611206124651260Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeISPsy18, transposase2e-0651.2
NC_014924:2840310:2848212284821228494561245Pseudoxanthomonas suwonensis 11-1 chromosome, complete genometransposase mutator type3e-0650.8
NC_016830:952342:9734999734999747491251Pseudomonas fluorescens F113 chromosome, complete genometransposase7e-0649.3
NC_016830:5031819:5051545505154550527951251Pseudomonas fluorescens F113 chromosome, complete genometransposase7e-0649.3
NC_016830:1645879:1657638165763816588881251Pseudomonas fluorescens F113 chromosome, complete genometransposase7e-0649.3
NC_007347:2421942:2429477242947724307361260Ralstonia eutropha JMP134 chromosome 1, complete sequenceTransposase, mutator type7e-0649.3