Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4670813 Polaromonas sp. JS666, complete genome

Start: 4670813, End: 4671124, Length: 312

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015724:339500:353765353765354076312Cupriavidus necator N-1 plasmid BB2p, complete sequencesarcosine oxidase alpha subunit1e-39161
NC_007948:4620661:464295346429534643252300Polaromonas sp. JS666, complete genomeputative sarcosine oxidase alpha subunit2e-33140
NC_007948:4646344:466141346614134661769357Polaromonas sp. JS666, complete genomehypothetical protein5e-1889.7
NC_015136:2282488:232551223255122325883372Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein2e-1478.2
NC_007948:4558000:457951045795104579806297Polaromonas sp. JS666, complete genomeputative sarcosine oxidase alpha subunit3e-1477.4
NC_010676:2793237:282227828222782822670393Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein4e-1476.6
NC_014910:1912552:193278219327821933078297Alicycliphilus denitrificans BC chromosome, complete genomesarcosine oxidase alpha subunit8e-1475.5
NC_011144:2674242:269414026941402694721582Phenylobacterium zucineum HLK1, complete genomesarcosine oxidase alpha subunit2e-1374.7
NC_015172:1075592:110772111077211108041321Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein1e-1168.6
NC_021184:2936244:294769929476992948022324Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein4e-1166.6
NC_003065:27163:630916309163384294Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein7e-1165.9
NC_003308:1:296882968829981294Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein7e-1165.9
NC_011883:2031222:203122220312222031530309Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein3e-1063.5
NC_015737:2691246:269282226928222693139318Clostridium sp. SY8519, complete genomeNAD-dependent dehydrogenase7e-1062.4
NC_013947:4363250:437861743786174378874258Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeferredoxin1e-0962
NC_014815:4621552:464977246497724650026255Micromonospora sp. L5 chromosome, complete genomehypothetical protein2e-0961.6
NC_020291:5409587:542230254223025422613312Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative anaerobic dehydrogenase2e-0961.2
NC_000868:318434:3190643190643205091446Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit alpha3e-0960.5
NC_009718:643200:6604156604156625822168Fervidobacterium nodosum Rt17-B1, complete genome6e-0959.7
NC_015474:301428:3014283014283028641437Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase, subunit alpha2e-0858.2
NC_000961:1532245:1532245153224515336931449Pyrococcus horikoshii OT3, complete genomeD-nopaline dehydrogenase1e-0858.2
NC_014364:3001597:302762630276263027937312Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein2e-0857.4
NC_013522:991649:101603210160321016343312Thermanaerovibrio acidaminovorans DSM 6589, complete genomesarcosine oxidase, alpha subunit7e-0855.8
NC_013926:71186:8670186701881371437Aciduliprofundum boonei T469 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase1e-0755.5
NC_003413:1666520:1667150166715016685741425Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase subunit alpha1e-0755.1
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase2e-0754.7
NC_008391:2404443:241860424186042418948345Burkholderia cepacia AMMD chromosome 2, complete sequencehypothetical protein1e-0651.6