Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4661413 Polaromonas sp. JS666, complete genome

Start: 4661413, End: 4661769, Length: 357

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:4646344:467081346708134671124312Polaromonas sp. JS666, complete genomeputative sarcosine oxidase alpha subunit5e-1889.7
NC_015724:339500:353765353765354076312Cupriavidus necator N-1 plasmid BB2p, complete sequencesarcosine oxidase alpha subunit6e-1889.4
NC_015136:2282488:232551223255122325883372Burkholderia sp. CCGE1001 chromosome 1, complete sequencehypothetical protein1e-1788.6
NC_007948:4558000:457951045795104579806297Polaromonas sp. JS666, complete genomeputative sarcosine oxidase alpha subunit1e-1788.6
NC_014910:1912552:193278219327821933078297Alicycliphilus denitrificans BC chromosome, complete genomesarcosine oxidase alpha subunit7e-1682.4
NC_007948:4620661:464295346429534643252300Polaromonas sp. JS666, complete genomeputative sarcosine oxidase alpha subunit3e-1580.5
NC_010676:2793237:282227828222782822670393Burkholderia phytofirmans PsJN chromosome 2, complete sequencehypothetical protein1e-1478.6
NC_011144:2674242:269414026941402694721582Phenylobacterium zucineum HLK1, complete genomesarcosine oxidase alpha subunit3e-1477
NC_014815:4621552:464977246497724650026255Micromonospora sp. L5 chromosome, complete genomehypothetical protein2e-1374.3
NC_011883:2031222:203122220312222031530309Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,hypothetical protein7e-1372.4
NC_009718:643200:6604156604156625822168Fervidobacterium nodosum Rt17-B1, complete genome6e-1269.7
NC_021184:2936244:294769929476992948022324Desulfotomaculum gibsoniae DSM 7213, complete genomehypothetical protein8e-1268.9
NC_015737:2691246:269282226928222693139318Clostridium sp. SY8519, complete genomeNAD-dependent dehydrogenase2e-1168.2
NC_013522:991649:101603210160321016343312Thermanaerovibrio acidaminovorans DSM 6589, complete genomesarcosine oxidase, alpha subunit3e-1167.4
NC_015172:1075592:110772111077211108041321Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein3e-1063.9
NC_020291:5409587:542230254223025422613312Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative anaerobic dehydrogenase7e-1062.4
NC_013926:71186:8670186701881371437Aciduliprofundum boonei T469 chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase3e-0960.5
NC_013947:4363250:437861743786174378874258Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeferredoxin9e-0958.9
NC_020210:3341976:335256433525643352875312Geobacillus sp. GHH01, complete genomehypothetical protein1e-0858.5
NC_014364:3001597:302762630276263027937312Spirochaeta smaragdinae DSM 11293 chromosome, complete genomehypothetical protein2e-0858.2
NC_015474:301428:3014283014283028641437Pyrococcus sp. NA2 chromosome, complete genomesarcosine oxidase, subunit alpha2e-0857.4
NC_012792:310443:3104433104433133972955Variovorax paradoxus S110 chromosome 2, complete genomeFAD dependent oxidoreductase5e-0856.6
NC_003065:27163:630916309163384294Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein5e-0856.2
NC_003308:1:296882968829981294Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencehypothetical protein5e-0856.2
NC_000961:1532245:1532245153224515336931449Pyrococcus horikoshii OT3, complete genomeD-nopaline dehydrogenase2e-0754.3
NC_000868:318434:3190643190643205091446Pyrococcus abyssi GE5, complete genomesarcosine oxidase, subunit alpha2e-0754.3
NC_003413:1666520:1667150166715016685741425Pyrococcus furiosus DSM 3638, complete genomesarcosine oxidase subunit alpha7e-0752.8
NC_016641:2773757:278662727866272786962336Paenibacillus terrae HPL-003 chromosome, complete genomesarcosine oxidase subunit alpha3e-0650.4