Pre_GI: BLASTP Hits

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Query: NC_007948:4646344:4654959 Polaromonas sp. JS666, complete genome

Start: 4654959, End: 4656110, Length: 1152

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:4620661:4630570463057046316881119Polaromonas sp. JS666, complete genomeExtracellular ligand-binding receptor8e-131467
NC_007948:360199:3792933792933804651173Polaromonas sp. JS666, complete genomeputative substrate-binding periplasmic (PBP) ABC transporter protein1e-102373
NC_007298:2947200:2965456296545629666821227Dechloromonas aromatica RCB, complete genomeExtracellular ligand-binding receptor4e-32139
NC_011386:1727203:1730320173032017315011182Oligotropha carboxidovorans OM5, complete genomeextracellular ligand-binding receptor3e-30132
NC_012856:1080000:1091343109134310924911149Ralstonia pickettii 12D chromosome 1, complete genomeExtracellular ligand-binding receptor7e-30131
NC_014931:2511423:2511423251142325125231101Variovorax paradoxus EPS chromosome, complete genomeExtracellular ligand-binding receptor3e-28126
NC_007948:4620661:462417046241704624484315Polaromonas sp. JS666, complete genome1e-27124
NC_008781:708811:7256137256137267611149Polaromonas naphthalenivorans CJ2, complete genomeExtracellular ligand-binding receptor2e-25117
NC_014844:2721746:2721746272174627230081263Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeextracellular ligand-binding receptor1e-1997.8
NC_009718:579291:5862885862885874481161Fervidobacterium nodosum Rt17-B1, complete genomeextracellular ligand-binding receptor2e-1790.5
NC_010003:528855:5516155516155528261212Petrotoga mobilis SJ95, complete genomeExtracellular ligand-binding receptor7e-1788.6
NC_020453:4696000:4700666470066647022221557Agromonas oligotrophica S58 DNA, complete genomebranched-chain amino acid ABC transporter periplasmic protein1e-1687.4
NC_007948:4620661:464092746409274641061135Polaromonas sp. JS666, complete genome4e-1685.9
NC_017187:1424371:1437768143776814389221155Arcobacter butzleri ED-1, complete genomeleucine/isoleucine/valine-binding protein2e-1583.6
NC_009850:1498111:1511506151150615126601155Arcobacter butzleri RM4018, complete genomeleucine/isoleucine/valine-binding protein1e-1480.9
NC_012658:545840:5468995468995480411143Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter amino acid-binding protein3e-1066.2
NC_016633:1898234:1899184189918419003501167Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter periplasmic protein1e-0860.8
NC_009436:2685910:2687061268706126881821122Enterobacter sp. 638, complete genomeextracellular ligand-binding receptor1e-0860.8
NC_014837:1144500:1169762116976211709401179Pantoea sp. At-9b chromosome, complete genomeextracellular ligand-binding receptor1e-0758.2
NC_012587:3613162:3635526363552636367191194Rhizobium sp. NGR234, complete genomeputative extracellular ligand-binding receptor6e-0755.5
NC_014540:1835493:1839220183922018404281209Burkholderia sp. CCGE1003 chromosome 2, complete sequenceextracellular ligand-binding receptor2e-0653.9
NC_015387:2072237:2073114207311420742381125Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeExtracellular ligand-binding receptor2e-0653.9
NC_007948:360199:3681863681863693161131Polaromonas sp. JS666, complete genomeExtracellular ligand-binding receptor3e-0653.5
NC_011768:79297:9265092650938341185Desulfatibacillum alkenivorans AK-01, complete genomeExtracellular ligand-binding receptor3e-0653.1
NC_017249:2109843:2125420212542021267181299Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein4e-0652.8
NC_008786:1507139:1526660152666015278381179Verminephrobacter eiseniae EF01-2, complete genomeExtracellular ligand-binding receptor4e-0652.8
NC_014831:2133060:2141827214182721430561230Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter substrate-binding protein, HAAT family4e-0652.8
NC_013939:913890:9285399285399296781140Deferribacter desulfuricans SSM1, complete genomebranched-chain amino acid ABC transporter substrate-binding protein5e-0652.4
NC_007777:5087405:5092992509299250943081317Frankia sp. CcI3, complete genomeABC-type branched-chain amino acid transport systems periplasmic component-like8e-0652
NC_016625:171341:2005792005792017031125Burkholderia sp. YI23 chromosome 2, complete sequenceextracellular ligand-binding receptor8e-0651.6
NC_009483:2489000:2489003248900324901421140Geobacter uraniireducens Rf4 chromosome, complete genomeextracellular ligand-binding receptor9e-0651.6