Pre_GI: BLASTP Hits

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Query: NC_007492:6372900:6396156 Pseudomonas fluorescens PfO-1, complete genome

Start: 6396156, End: 6397367, Length: 1212

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007948:517893:5379705379705392771308Polaromonas sp. JS666, complete genomecytochrome c biogenesis protein, transmembrane region1e-97357
NC_010002:3357752:3380566338056633823951830Delftia acidovorans SPH-1, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen1e-97356
NC_010557:207846:2245362245362264041869Burkholderia ambifaria MC40-6 chromosome 3, complete sequencecytochrome c biogenesis protein transmembrane region3e-97355
NC_015508:296856:3335893335893353401752Agrobacterium sp. H13-3 chromosome linear, complete sequenceputative cytochrome c biogenesis protein3e-94345
NC_009254:74000:7486974869767371869Burkholderia vietnamiensis G4 chromosome 3, complete sequencecytochrome c biogenesis protein, transmembrane region9e-94343
NC_015376:1185000:1199418119941812015052088Burkholderia gladioli BSR3 chromosome chromosome 2, completeCytochrome c biogenesis protein, transmembrane region2e-57223
NC_009255:213245:231156231156231746591Burkholderia vietnamiensis G4 chromosome 2, complete sequenceredoxin domain-containing protein7e-44178
NC_010612:2215724:2233553223355322353641812Mycobacterium marinum M, complete genomeintegral membrane C-type cytochrome biogenesis protein DipZ8e-44177
NC_020133:2144752:2164069216406921658141746Mycobacterium liflandii 128FXT, complete genomeintegral membrane C-type cytochrome biogenesis protein DipZ2e-43176
NC_010085:702901:7212097212097223181110Nitrosopumilus maritimus SCM1, complete genomeRedoxin domain protein1e-42174
NC_019771:4922140:4924635492463549261551521Anabaena cylindrica PCC 7122, complete genomeNHL repeat containing protein4e-24112
NC_016024:1472421:147734914773491477792444Candidatus Chloracidobacterium thermophilum B chromosome chromosomethiol-disulfide isomerase / thioredoxin6e-22105
NC_013715:1907503:1921473192147319234431971Rothia mucilaginosa DY-18, complete genomethiol-disulfide isomerase3e-1893.2
NC_000964:1474451:149218214921821492643462Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein4e-1686.3
NC_014315:1169910:117141611714161171934519Nitrosococcus watsoni C-113 chromosome, complete genomeredoxin domain-containing protein6e-1375.5
NC_008609:3732192:373219237321923732707516Pelobacter propionicus DSM 2379, complete genomeRedoxin domain protein5e-1169.3
NC_014973:4630132:466066846606684661180513Geobacter sp. M18 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen7e-1168.9
NC_006510:2110430:211863121186312119170540Geobacillus kaustophilus HTA426, complete genomethiol:disulfide interchange protein (thioredoxin)3e-1067
NC_013411:2951559:296061029606102961164555Geobacillus sp. Y412MC61, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen6e-1065.9
NC_014915:2092678:210054221005422101096555Geobacillus sp. Y412MC52 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen6e-1065.9
NC_010688:2400471:2400932240093224023771446Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-0963.5
NC_003902:2469500:2499758249975825012571500Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein3e-0963.5
NC_007086:2408837:2410050241005024115491500Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein3e-0963.5
NC_003919:2435058:2439337243933724408361500Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein4e-0963.2
NC_012785:205502:221282221282222016735Kosmotoga olearia TBF 19.5.1, complete genomecytochrome c biogenesis protein transmembrane region3e-0963.2
NC_010678:900389:927639927639928367729Ralstonia pickettii 12J chromosome 2, complete sequencecytochrome c biogenesis protein transmembrane region5e-0962.8
NC_012857:41946:691966919669924729Ralstonia pickettii 12D chromosome 2, complete genomecytochrome c biogenesis protein transmembrane region5e-0962.8
NC_015275:3407358:3437747343774734389431197Clostridium lentocellum DSM 5427 chromosome, complete genomecytochrome c biogenesis protein transmembrane region1e-0861.2
NC_020126:2687627:268848226884822689039558Myxococcus stipitatus DSM 14675, complete genomethioredoxin family protein3e-0860.1
NC_007677:3469661:348035334803533480946594Salinibacter ruber DSM 13855, complete genomecytochrome c biogenesis protein, thiol:disulfide interchange protein4e-0859.7
NC_020210:788639:8155698155698166901122Geobacillus sp. GHH01, complete genomehypothetical protein5e-0859.3
NC_005945:3359598:337789633778963378471576Bacillus anthracis str. Sterne, complete genomeahpC/TSA family protein7e-0858.9
NC_007760:2094746:212053421205342121055522Anaeromyxobacter dehalogenans 2CP-C, complete genomecytochrome c biogenesis protein, thiol-disulfide interchange protein2e-0757.4
NC_015161:927152:942257942257942847591Deinococcus proteolyticus MRP chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen2e-0757.4
NC_012856:207194:207194207194207751558Ralstonia pickettii 12D chromosome 1, complete genomeRedoxin domain protein3e-0757
NC_011899:1926000:194284319428431943379537Halothermothrix orenii H 168, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen2e-0757
NC_014831:1906691:192029719202971920908612Thermaerobacter marianensis DSM 12885 chromosome, complete genomealkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen3e-0756.6
NC_013410:89811:109070109070109837768Fibrobacter succinogenes subsp. succinogenes S85 chromosome,redoxin domain-containing protein3e-0756.6
NC_013205:1123280:116223811622381162819582Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen5e-0756.2
NC_017030:2299592:232353423235342324118585Corallococcus coralloides DSM 2259 chromosome, complete genomethioredoxin family protein5e-0755.8
NC_016593:981500:9924499924499936481200Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completecytochrome c biogenesis protein8e-0755.5
NC_006322:1959918:196495219649521965218267Bacillus licheniformis ATCC 14580, complete genomehypothetical protein7e-0755.5
NC_008740:1414926:143026314302631430985723Marinobacter aquaeolei VT8, complete genomecytochrome c biogenesis protein, transmembrane region8e-0755.1
NC_015565:2508345:252955725295572530015459Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completealkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen1e-0655.1
NC_016628:1:1503215032161021071Vibrio furnissii NCTC 11218 chromosome 2, complete sequencealkyl hydroperoxide reductase2e-0653.9
NC_013192:305478:320479320479321117639Leptotrichia buccalis DSM 1135, complete genomecytochrome c biogenesis protein transmembrane region3e-0653.5