Pre_GI: BLASTP Hits

Some Help

Query: NC_007492:3655545:3681251 Pseudomonas fluorescens PfO-1, complete genome

Start: 3681251, End: 3686137, Length: 4887

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1594608:1594608159460815994494842Vibrio cholerae IEC224 chromosome I, complete sequenceNAD-specific glutamate dehydrogenase01406
NC_008148:2498000:2542337254233725471934857Rubrobacter xylanophilus DSM 9941, complete genomeNAD-glutamate dehydrogenase01394
NC_016745:2229271:2256453225645322612884836Oceanimonas sp. GK1 chromosome, complete genomeNAD-glutamate dehydrogenase01371
NC_014118:1331164:1331164133116413360024839Burkholderia sp. CCGE1002 chromosome chromosome 2, completeNAD-glutamate dehydrogenase01334
NC_013757:2706835:2706835270683527116794845Geodermatophilus obscurus DSM 43160, complete genomeNAD-glutamate dehydrogenase01301
NC_014311:2385666:2404620240462024095844965Ralstonia solanacearum PSI07 chromosome, complete genomeNAD-glutamate dehydrogenase (gdhB)01293
NC_007908:1600244:1622497162249716272694773Rhodoferax ferrireducens T118, complete genomeNAD-glutamate dehydrogenase01291
NC_019673:1384795:1384795138479513897624968Saccharothrix espanaensis DSM 44229 complete genomeNAD-specific glutamate dehydrogenase01226
NC_015145:2693749:2731765273176527366184854Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeglutamate dehydrogenase (NAD)01124
NC_010168:1373337:1392982139298213978624881Renibacterium salmoninarum ATCC 33209 chromosome, complete genomeNAD-specific glutamate dehydrogenase01085
NC_010511:4258000:4290282429028242951234842Methylobacterium sp. 4-46 chromosome, complete genomeNAD-glutamate dehydrogenase01044
NC_014550:2355500:2371385237138523761784794Arthrobacter arilaitensis Re117, complete genomeNAD-specific glutamate dehydrogenase01038
NC_015312:6357469:6352974635297463574824509Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeNAD-glutamate dehydrogenase0983
NC_002978:200878:2025332025332072574725Wolbachia endosymbiont of Drosophila melanogaster, complete genomehypothetical protein0950
NC_012416:205925:2113742113742161074734Wolbachia sp. wRi, complete genomehypothetical protein0939
NC_016913:83988:1010701010701058244755Rickettsia rickettsii str. Brazil chromosome, complete genomeNAD-specific glutamate dehydrogenase0937
NC_017042:1206000:1223332122333212280864755Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completeNAD-specific glutamate dehydrogenase0937
NC_016050:1088223:1088223108822310929744752Rickettsia japonica YH, complete genomeNAD-specific glutamate dehydrogenase0927
NC_014006:924417:9244179244179290844668Sphingobium japonicum UT26S chromosome 1, complete genomeNAD-specific glutamate dehydrogenase0916
NC_012026:415447:4301844301844347014518Anaplasma marginale str. Florida, complete genomeNAD-specific glutamate dehydrogenase0911
NC_015594:214500:2315972315972362614665Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeNAD-glutamate dehydrogenase0888
NC_016887:221788:2353782353782387703393Nocardia cyriacigeorgica GUH-2, complete genomeputative NAD-specific glutamate dehydrogenase0829
NC_013939:1927424:1944105194410519487904686Deferribacter desulfuricans SSM1, complete genomeNAD-glutamate dehydrogenase0793
NC_014315:3207684:3214626321462632194104785Nitrosococcus watsoni C-113 chromosome, complete genomeNAD-glutamate dehydrogenase0744
NC_007484:3358000:3364313336431333690974785Nitrosococcus oceani ATCC 19707, complete genomeNAD-glutamate dehydrogenase0733
NC_008278:132000:1489721489721523013330Frankia alni ACN14a, complete genomeputative NAD-specific glutamate dehydrogenase (NAD-GDH)1e-178628
NC_009483:1116385:1131916113191611348762961Geobacter uraniireducens Rf4 chromosome, complete genomeGlu/Leu/Phe/Val dehydrogenase9e-1687.4
NC_014973:3151701:3166746316674631697062961Geobacter sp. M18 chromosome, complete genomeglutamate dehydrogenase5e-1481.6
NC_012918:1697860:1698680169868017016402961Geobacter sp. M21 chromosome, complete genomeglutamate dehydrogenase4e-1171.6