Pre_GI: BLASTP Hits

Some Help

Query: NC_007333:39579:75451 Thermobifida fusca YX, complete genome

Start: 75451, End: 79521, Length: 4071

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:3770282:3777612377761237800982487Pseudomonas mendocina ymp, complete genomehypothetical protein1e-26122
NC_009656:4527457:4566763456676345696272865Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-24116
NC_008463:2467219:2485638248563824881362499Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein2e-24115
NC_004578:3193490:3215716321571632183162601Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-22110
NC_014500:3175283:3191323319132331927381416Dickeya dadantii 3937 chromosome, complete genomehypothetical protein1e-22110
NC_012918:1444333:1452863145286314553252463Geobacter sp. M21 chromosome, complete genomehypothetical protein5e-22107
NC_010002:5691968:5703969570396957063652397Delftia acidovorans SPH-1, complete genomehypothetical protein2e-21105
NC_017047:2042346:2054994205499420573002307Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein5e-21104
NC_007952:3196085:3222380322238032248182439Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein3e-20102
NC_007493:1929000:1936160193616019386972538Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceplasma membrane H+-transporting two-sector ATPase, C subunit1e-20102
NC_016612:28451:4413244132464412310Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-20100
NC_019673:6259229:6259229625922962614902262Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein7e-20100
NC_008435:2658986:2686492268649226888912400Rhodopseudomonas palustris BisA53, complete genomehypothetical protein9e-1893.6
NC_015580:1584078:1593435159343515959542520Novosphingobium sp. PP1Y, complete genomeplasma membrane H+-transporting two-sector ATPase, C subunit2e-1689
NC_006370:1810842:1826082182608218283912310Photobacterium profundum SS9 chromosome 1, complete sequencehypothetical protein6e-1687.8
NC_014910:1200605:1213322121332212152201899Alicycliphilus denitrificans BC chromosome, complete genome6e-1480.9
NC_014217:2020737:2033955203395520371133159Starkeya novella DSM 506 chromosome, complete genomePeptidoglycan-binding domain 1 protein1e-1276.6
NC_016010:1822212:1846235184623518475571323Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein4e-0655.1