Pre_GI: BLASTP Hits

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Query: NC_007333:39579:53663 Thermobifida fusca YX, complete genome

Start: 53663, End: 55018, Length: 1356

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015953:2349503:2380735238073523819971263Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein4e-67256
NC_020211:4598217:4607213460721346084901278Serratia marcescens WW4, complete genomeRloA protein9e-64244
NC_007952:3037590:3041522304152230427901269Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative phage resistance protein2e-60233
NC_014836:2527000:2540159254015925414211263Desulfurispirillum indicum S5 chromosome, complete genomeRloA protein8e-58224
NC_019012:61360:8042180421817611341Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequencehypothetical protein2e-57223
NC_015873:924392:9473809473809486001221Megasphaera elsdenii DSM 20460, complete genomehypothetical protein5e-51202
NC_004307:1108325:1119574111957411208931320Bifidobacterium longum NCC2705, complete genomehypothetical protein with similarity to AbiLI: abortive phage resistance protein7e-49195
NC_015437:27325:6991569915711921278Selenomonas sputigena ATCC 35185 chromosome, complete genomehypothetical protein2e-47190
NC_015160:4285542:4321171432117143224421272Odoribacter splanchnicus DSM 20712 chromosome, complete genomeputative abortive infection protein2e-46187
NC_007492:1193626:1206066120606612074091344Pseudomonas fluorescens PfO-1, complete genomeATPase-like6e-43175
NC_009614:4528418:4542517454251745437881272Bacteroides vulgatus ATCC 8482 chromosome, complete genomeATPase involved in transport2e-39163
NC_014033:2080818:2088387208838720896161230Prevotella ruminicola 23 chromosome, complete genomehypothetical protein3e-37156
NC_019968:1235500:1252664125266412538811218Prevotella dentalis DSM 3688 chromosome 2, complete sequencehypothetical protein8e-37155
NC_009614:978506:99920599920510004491245Bacteroides vulgatus ATCC 8482 chromosome, complete genomeATPase5e-36152
NC_010681:1202929:1212647121264712140171371Burkholderia phytofirmans PsJN chromosome 1, complete sequenceabortive phage resistance protein-like protein5e-31135
NC_017221:1763914:1774248177424817752911044Bifidobacterium longum subsp. longum KACC 91563 chromosome,hypothetical protein4e-31135
NC_015977:2565922:2577628257762825788751248Roseburia hominis A2-183 chromosome, complete genomeabortive infection protein1e-30134
NC_014151:3663295:3674721367472136760071287Cellulomonas flavigena DSM 20109 chromosome, complete genomehypothetical protein5e-30132
NC_016630:1890917:1891853189185318932531401Filifactor alocis ATCC 35896 chromosome, complete genomeabortive phage resistance protein1e-29131
NC_003454:63500:6724067240686281389Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTransporter4e-26119
NC_004369:3082691:3096528309652830978231296Corynebacterium efficiens YS-314, complete genomehypothetical protein8e-25115
NC_011369:4395773:4406025440602544072421218Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completeabortive infection protein2e-23110
NC_019968:1084288:1119128111912811204261299Prevotella dentalis DSM 3688 chromosome 2, complete sequenceputative ATPase2e-23110
NC_009614:4528418:4544796454479645461061311Bacteroides vulgatus ATCC 8482 chromosome, complete genomehypothetical protein5e-23109
NC_014363:480049:5025175025175037071191Olsenella uli DSM 7084 chromosome, complete genomehypothetical protein2e-1997.1
NC_012917:569856:5785235785235797461224Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeabortive infection protein2e-1790.5
NC_004578:4499143:4507088450708845082541167Pseudomonas syringae pv. tomato str. DC3000, complete genomeabortive infection protein, internal deletion1e-1481.3
NC_017294:403422:414460414460415446987Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomehypothetical protein3e-1273.6
NC_013740:842841:8530028530028543181317Acidaminococcus fermentans DSM 20731, complete genomeabortive infection protein, putative5e-1272.8
NC_014376:597000:5983835983835996031221Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein4e-1066.2
NC_010610:107500:1262831262831274911209Lactobacillus fermentum IFO 3956, complete genomehypothetical protein6e-0652.4