Pre_GI: BLASTP Hits

Some Help

Query: NC_007005:4992730:5013079 Pseudomonas syringae pv. syringae B728a, complete genome

Start: 5013079, End: 5014383, Length: 1305

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012660:2143376:2173735217373521750391305Pseudomonas fluorescens SBW25 chromosome, complete genomeputative methyl-accepting chemotaxis protein2e-179629
NC_014258:42262:7431074310754761167Pantoea vagans C9-1 plasmid pPag3, complete sequencehypothetical protein3e-62239
NC_014305:66500:792567925680215960Erwinia billingiae Eb661 plasmid pEB170, complete sequenceMethyl-accepting chemotaxis protein, fragment7e-41168
NC_012988:769981:7831147831147862003087Methylobacterium extorquens DM4, complete genomediguanylate cyclase/phosphodiesterase2e-1997.1
NC_010511:3160123:3164569316456931677423174Methylobacterium sp. 4-46 chromosome, complete genomePAS/PAC sensor hybrid histidine kinase8e-1892
NC_000911:3075896:3075896307589630785502655Synechocystis sp. PCC 6803, complete genomePleD-like protein9e-1891.7
NC_017039:3073724:3073724307372430763782655Synechocystis sp. PCC 6803 substr. PCC-P, complete genomePleD gene product9e-1891.7
NC_017052:3073713:3073713307371330763672655Synechocystis sp. PCC 6803 substr. PCC-N, complete genomeprotein PleD9e-1891.7
NC_007650:1192310:1195310119531011967011392Burkholderia thailandensis E264 chromosome II, complete sequencesensory box histidine kinase/response regulator1e-1791.3
NC_013222:817686:8545518545518563681818Robiginitalea biformata HTCC2501, complete genomehistidine kinase sensor protein1e-1688.2
NC_007604:1875268:1880981188098118840943114Synechococcus elongatus PCC 7942, complete genomediguanylate cyclase (GGDEF domain) with PAS/PAC sensor5e-1685.9
NC_006576:2423250:2432957243295724360703114Synechococcus elongatus PCC 6301, complete genomehypothetical protein1e-1584.7
NC_019745:2346970:2367232236723223697362505Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase6e-1582.4
NC_009925:6024888:6043838604383860485324695Acaryochloris marina MBIC11017, complete genometwo-component hybrid sensor and regulator histidine kinase7e-1582
NC_011884:5019500:5056299505629950589322634Cyanothece sp. PCC 7425, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)4e-1479.7
NC_009925:5957806:5957806595780659602412436Acaryochloris marina MBIC11017, complete genomePAS/PAC sensor signal transduction histidine kinase4e-1479.7
NC_014355:3435343:3456236345623634590102775Candidatus Nitrospira defluvii, complete genomeputative sensor histidine kinase2e-1377.8
NC_020389:2288541:2315191231519123189703780Methanosarcina mazei Tuc01, complete genomehypothetical protein1e-1377.8
NC_013223:1349000:1352416135241613546922277Desulfohalobium retbaense DSM 5692, complete genomePAS/PAC sensor hybrid histidine kinase2e-1377.4
NC_008609:1976403:2056927205692720599112985Pelobacter propionicus DSM 2379, complete genomemulti-sensor hybrid histidine kinase2e-1377.4
NC_018645:4879931:4900050490005049038533804Desulfobacula toluolica Tol2, complete genometwo component system sensor histidine kinase, hybrid8e-1375.5
NC_020389:2288541:2311522231152223148033282Methanosarcina mazei Tuc01, complete genomesensory transduction histidine kinase2e-1273.9
NC_003901:2685716:2707585270758527109083324Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase1e-1171.6
NC_003901:2685716:2711444271144427152233780Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase1e-1171.6
NC_010511:6067000:6123549612354961253091761Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase2e-1170.5
NC_011757:517000:5364535364535397223270Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase3e-1170.1
NC_007492:6372900:6398433639843363999801548Pseudomonas fluorescens PfO-1, complete genomePAS/PAC Sensor Signal Transduction Histidine Kinase3e-1170.1
NC_008700:3692333:3711339371133937150493711Shewanella amazonensis SB2B, complete genomesensory box histidine kinase/response regulator8e-1168.9
NC_017249:263873:2751592751592777052547Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-1168.9
NC_009254:442360:4590134590134608271815Burkholderia vietnamiensis G4 chromosome 3, complete sequencediguanylate cyclase with PAS/PAC sensor1e-1068.2
NC_015675:4526500:4532750453275045363103561Mesorhizobium opportunistum WSM2075 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase2e-1067.8
NC_010172:480000:4827384827384864153678Methylobacterium extorquens PA1, complete genomePAS sensor protein2e-1067.4
NC_011757:5102732:5112434511243451167054272Methylobacterium chloromethanicum CM4, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)4e-1066.6
NC_015572:3723498:3731465373146537333031839Methylomonas methanica MC09 chromosome, complete genomeLuxR family two component transcriptional regulator4e-1066.6
NC_014623:5661108:5679531567953156822302700Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesensor protein4e-1066.6
NC_015572:65597:6559765597697574161Methylomonas methanica MC09 chromosome, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase4e-1066.2
NC_012988:769981:8298128298128317011890Methylobacterium extorquens DM4, complete genomeHWE family histidine kinase9e-1065.1
NC_007355:2039435:2054203205420320570402838Methanosarcina barkeri str. fusaro chromosome 1, complete sequencesensory transduction histidine kinase1e-0965.1
NC_007626:697926:7179257179257196851761Magnetospirillum magneticum AMB-1, complete genomeSignal transduction histidine kinase2e-0964.3
NC_012030:400515:4137984137984163742577Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completePAS/PAC sensor signal transduction histidine kinase3e-0963.5
NC_010505:5525461:5546057554605755497313675Methylobacterium radiotolerans JCM 2831, complete genomemulti-sensor hybrid histidine kinase3e-0963.2
NC_012988:1540587:1540587154058715421191533Methylobacterium extorquens DM4, complete genomeHWE family histidine kinase3e-0963.2
NC_010172:798923:8550408550408569141875Methylobacterium extorquens PA1, complete genomePAS sensor protein3e-0963.2
NC_011757:1288637:1288637128863712901391503Methylobacterium chloromethanicum CM4, complete genomesignal transduction histidine kinase4e-0963.2
NC_013173:1861269:1861269186126918646643396Desulfomicrobium baculatum DSM 4028, complete genomePAS/PAC sensor hybrid histidine kinase7e-0962.4
NC_016622:527688:5304025304025328162415Azospirillum lipoferum 4B, complete genomeputative sensor histidine kinase6e-0962.4
NC_002947:4994335:499710049971004998098999Pseudomonas putida KT2440, complete genomesensory box protein9e-0962
NC_015726:2817352:2821000282100028239002901Cupriavidus necator N-1 chromosome 1, complete sequencediguanylate cyclase YegE2e-0860.8
NC_011146:2485625:2505098250509825070351938Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor signal transduction histidine kinase3e-0860.1
NC_019745:2346970:2351713235171323570075295Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase3e-0860.1
NC_017955:3670670:3685066368506636871922127Modestobacter marinus, complete genometwo-component PAS/PAC sensor protein4e-0859.7
NC_011894:6516856:6541953654195365438601908Methylobacterium nodulans ORS 2060, complete genomesignal transduction histidine kinase4e-0859.7
NC_012559:978419:9795639795639831803618Laribacter hongkongensis HLHK9, complete genomeSensor protein5e-0859.3
NC_019771:4922140:4940792494079249438153024Anabaena cylindrica PCC 7122, complete genomemulti-sensor hybrid histidine kinase5e-0859.3
NC_012968:435532:4411884411884441182931Methylotenera mobilis JLW8, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)7e-0858.9
NC_012988:769981:8362228362228394193198Methylobacterium extorquens DM4, complete genomesensor hybrid histidine kinase with multiple PAS/PAC and response regulator receiver domains9e-0858.5
NC_009633:2137999:2153158215315821554792322Alkaliphilus metalliredigens QYMF chromosome, complete genomePAS/PAC sensor hybrid histidine kinase1e-0758.2
NC_010172:798923:8596738596738628703198Methylobacterium extorquens PA1, complete genomePAS sensor protein1e-0758.2
NC_014217:1352777:1364021136402113662822262Starkeya novella DSM 506 chromosome, complete genomemulti-sensor signal transduction histidine kinase1e-0757.8
NC_014654:221707:2364332364332389612529Halanaerobium sp. 'sapolanicus' chromosome, complete genomediguanylate cyclase with PAS/PAC sensor1e-0757.8
NC_015638:3113253:3120131312013131259295799Lacinutrix sp. 5H-3-7-4 chromosome, complete genometranscriptional regulator, NifA subfamily, Fis Family2e-0757.4
NC_000911:1284552:1306436130643613093482913Synechocystis sp. PCC 6803, complete genomehypothetical protein2e-0757.4
NC_017039:1283732:1305463130546313083752913Synechocystis sp. PCC 6803 substr. PCC-P, complete genomesensory histidine kinase Hik172e-0757.4
NC_017052:1283720:1305451130545113083632913Synechocystis sp. PCC 6803 substr. PCC-N, complete genomesensory histidine kinase Hik172e-0757.4
NC_017277:1283477:1305253130525313081652913Synechocystis sp. PCC 6803, complete genomesensory histidine kinase Hik172e-0757.4
NC_014654:221707:2249142249142284743561Halanaerobium sp. 'sapolanicus' chromosome, complete genomePAS/PAC sensor hybrid histidine kinase2e-0757.4
NC_011901:1122357:1135277113527711369561680Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completediguanylate cyclase3e-0757
NC_020388:2662947:2677668267766826793411674Natronomonas moolapensis 8.8.11 complete genomesensor/bat box HTH-10 family transcription regulator4e-0756.6
NC_015675:4526500:4538364453836445414443081Mesorhizobium opportunistum WSM2075 chromosome, complete genomemulti-sensor signal transduction histidine kinase5e-0756.2
NC_013722:1905655:1929029192902919329613933Xanthomonas albilineans, complete genomeputative two-component system sensor protein8e-0755.5
NC_018876:2628966:2661537266153726637172181Methanolobus psychrophilus R15 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase9e-0755.1
NC_015638:3113253:3126386312638631309304545Lacinutrix sp. 5H-3-7-4 chromosome, complete genomemulti-sensor signal transduction histidine kinase1e-0655.1
NC_011757:3486283:3524427352442735276243198Methylobacterium chloromethanicum CM4, complete genomePAS/PAC sensor hybrid histidine kinase1e-0654.7
NC_010511:915313:9402709402709418081539Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase1e-0654.7
NC_014934:4164603:4164603416460341675092907Cellulophaga algicola DSM 14237 chromosome, complete genomemulti-sensor signal transduction histidine kinase1e-0654.7
NC_010511:1691753:1700054170005417029812928Methylobacterium sp. 4-46 chromosome, complete genomemulti-sensor hybrid histidine kinase1e-0654.7
NC_003552:1492500:1513317151331715176874371Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase1e-0654.7
NC_014507:1127115:1128419112841911312472829Methanoplanus petrolearius DSM 11571 chromosome, complete genomeputative PAS/PAC sensor protein1e-0654.7
NC_014829:1154520:1171206117120611742563051Bacillus cellulosilyticus DSM 2522 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)2e-0654.3
NC_019745:2346970:2356994235699423623545361Gloeocapsa sp. PCC 7428, complete genomemulti-sensor hybrid histidine kinase2e-0653.9
NC_007413:4278252:4297741429774143003382598Anabaena variabilis ATCC 29413, complete genomePAS/PAC Sensor Hybrid Histidine Kinase3e-0653.5
NC_014965:2200974:2223379222337922255292151Vibrio vulnificus MO6-24/O chromosome I, complete sequencesignal transduction histidine kinase3e-0653.5
NC_011770:4542183:4565798456579845691603363Pseudomonas aeruginosa LESB58, complete genomehypothetical protein3e-0653.5
NC_007355:970670:9875989875989903542757Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein4e-0653.1
NC_016609:7565483:7569334756933475724833150Niastella koreensis GR20-10 chromosome, complete genomeputative signal transduction histidine kinase4e-0653.1
NC_008463:4342119:4365841436584143692033363Pseudomonas aeruginosa UCBPP-PA14, complete genomehypothetical protein3e-0653.1
NC_017267:2698944:2718009271800927214043396Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetwo-component system sensor-response regulator hybrid protein6e-0652.8
NC_017955:3057592:307736830773683078120753Modestobacter marinus, complete genomePAS/PAC sensor protein6e-0652.4
NC_016614:822715:839152839152840123972Vibrio sp. EJY3 chromosome 2, complete sequencediguanylate cyclase/phosphodiesterase domain 27e-0652.4
NC_019940:1727384:1727384172738417329335550Thioflavicoccus mobilis 8321 chromosome, complete genomePAS domain-containing protein9e-0652