Pre_GI: BLASTP Hits

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Query: NC_006905:4638707:4667248 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 4667248, End: 4667709, Length: 462

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:4560902:458713045871304587591462Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-82304
NC_004631:4687270:470649747064974706958462Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein3e-82303
NC_011147:4460726:449607844960784496539462Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-81301
NC_015761:4355335:437286443728644373325462Salmonella bongori NCTC 12419, complete genomehypothetical protein2e-75280
NC_011205:4718239:474455047445504744918369Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-66250
NC_010102:4745949:476520347652034765571369Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-65246
NC_012125:4716000:474470747447074745024318Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein5e-56216
NC_016513:1924242:193794819379481938439492Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeCrcB family protein4e-1683.6
NC_009615:1734752:1775003177500317773092307Parabacteroides distasonis ATCC 8503 chromosome, complete genomebeta-glycosidase4e-1683.6
NC_010505:2690939:271704827170482717500453Methylobacterium radiotolerans JCM 2831, complete genomeprotein of unknown function DUF3022e-1478.2
NC_015761:1181186:1186601118660111882321632Salmonella bongori NCTC 12419, complete genomebeta-lactamase2e-1478.2
NC_003106:1809137:183144918314491831817369Sulfolobus tokodaii str. 7, complete genomehypothetical protein3e-1477.4
NC_009485:1946000:196167619616761962083408Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein2e-1374.3
NC_016776:3973428:3982941398294139845541614Bacteroides fragilis 638R, complete genomeputative exported beta-lactamase protein4e-1373.9
NC_003228:3934770:3944283394428339458961614Bacteroides fragilis NCTC 9343, complete genomeputative exported beta-lactamase protein4e-1373.9
NC_006347:4031000:4040529404052940421421614Bacteroides fragilis YCH46, complete genomeputative peptidase4e-1373.9
NC_005877:284829:298843298843299223381Picrophilus torridus DSM 9790, complete genomehypothetical protein1e-1065.9
NC_012623:1405893:142714114271411427512372Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein2e-0961.6
NC_015942:763500:781232781232781696465Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein2e-0858.2
NC_012483:1408500:143718214371821437640459Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein1e-0755.5
NC_014935:1511835:152984715298471530329483Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein3e-0650.8