Pre_GI: BLASTP Hits

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Query: NC_006905:326517:335030 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 335030, End: 335344, Length: 315

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:2540500:256570325657032566017315Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-47187
NC_003198:331314:339851339851340156306Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein6e-45179
NC_012125:326909:334900334900335142243Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein3e-41166
NC_011205:329155:344014344014344256243Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein3e-40163
NC_016863:332060:340428340428340676249Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative cytoplasmic protein9e-39158
NC_016832:2612809:263792926379292638162234Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein3e-30130
NC_015968:511282:528718528718529191474Enterobacter asburiae LF7a chromosome, complete genomehypothetical protein1e-28125
NC_017046:329847:339930339930340121192Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein7e-28122
NC_016860:332087:340455340455340646192Salmonella enterica subsp. enterica serovar Typhimurium strputative cytoplasmic protein7e-28122
NC_016514:506611:530199530199530657459Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-27120
NC_011094:334267:341337341337341516180Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein4e-27119
NC_014121:677799:696780696780697235456Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein4e-27119
NC_011080:333121:344281344281344457177Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-24110
NC_011205:329155:337601337601337810210Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein9e-24108
NC_013592:2160000:217890621789062179175270Dickeya dadantii Ech586, complete genomehypothetical protein8e-1475.5
NC_012912:2174183:219338421933842193671288Dickeya zeae Ech1591, complete genomeDomain of unknown function DUF1813 HSP20-like protein4e-1373.6
NC_015663:1869000:190067619006761900858183Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-1270.5
NC_012912:2285778:230357823035782303790213Dickeya zeae Ech1591, complete genomeDomain of unknown function DUF1813 HSP20-like protein3e-1270.5
NC_016857:329849:339932339932340045114Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74hypothetical protein3e-1167
NC_011149:309556:321823321823321936114Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-1167
NC_004547:3817656:382804538280453828374330Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-0961.6
NC_004547:3817656:382111538211153821444330Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-0961.6
NC_013592:2160000:217623521762352176441207Dickeya dadantii Ech586, complete genomeDomain of unknown function DUF1813 HSP20-like protein2e-0961.2
NC_013716:3109700:312146731214673121664198Citrobacter rodentium ICC168, complete genomehypothetical protein5e-0856.6
NC_016860:332087:34039034039034048293Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-0753.9
NC_013421:2613137:263011926301192630457339Pectobacterium wasabiae WPP163, complete genomeDomain of unknown function DUF1813 HSP20-like protein1e-0652
NC_014228:2883500:288362528836252883954330Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-0650.8