Pre_GI: BLASTP Hits

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Query: NC_006511:1243817:1265985 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Start: 1265985, End: 1266299, Length: 315

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012563:1348500:135103713510371351348312Clostridium botulinum A2 str. Kyoto, complete genomerhodanese domain protein1e-1168.2
NC_017297:1280963:128168112816811281992312Clostridium botulinum F str. 230613 chromosome, complete genomeputative phage shock protein1e-1168.2
NC_014387:3227875:324499132449913245794804Butyrivibrio proteoclasticus B316 chromosome 1, complete genomerhodanese domain-containing protein9e-1165.5
NC_016628:1190366:120513512051351205509375Vibrio furnissii NCTC 11218 chromosome 2, complete sequencephage shock protein E2e-1064.7
NC_014828:637523:640898640898641248351Ethanoligenens harbinense YUAN-3 chromosome, complete genomeRhodanese domain protein4e-1063.2
NC_015949:1887478:1903596190359619052841689Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase2e-0960.8
NC_008601:1151653:117115811711581171907750Francisella tularensis subsp. novicida U112, complete genomerhodanese-like family protein3e-0960.5
NC_011979:537862:559561559561559938378Geobacter sp. FRC-32, complete genomeRhodanese domain protein3e-0857
NC_006274:765870:778935778935779294360Bacillus cereus E33L, complete genomerhodanese-like domain protein5e-0856.6
NC_008095:5312926:531462553146255314981357Myxococcus xanthus DK 1622, complete genomerhodanese-like domain protein4e-0856.6
NC_015740:1594376:161599116159911616347357Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completerhodanese domain-containing protein8e-0855.8
NC_014376:4369666:438447743844774384791315Clostridium saccharolyticum WM1 chromosome, complete genomeRhodanese domain protein2e-0754.3
NC_014152:927969:9433949433949450701677Thermincola sp. JR, complete genomeFAD-dependent pyridine nucleotide-disulfide oxidoreductase8e-0752.4
NC_013411:2951559:295364829536482954013366Geobacillus sp. Y412MC61, complete genomeRhodanese domain protein9e-0752.4
NC_014915:2092678:209358020935802093945366Geobacillus sp. Y412MC52 chromosome, complete genomeRhodanese domain protein9e-0752.4
NC_009848:161373:183390183390183743354Bacillus pumilus SAFR-032, complete genomerhodanese-domain-containing protein1e-0652
NC_019842:484933:518723518723519289567Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein1e-0652
NC_017208:823540:835831835831836190360Bacillus thuringiensis serovar chinensis CT-43 chromosome, completerhodanese-related sulfurtransferase1e-0651.6
NC_008610:1068429:107591110759111076198288Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica),Rhodanese domain protein2e-0651.6
NC_014976:684000:696441696441696995555Bacillus subtilis BSn5 chromosome, complete genomeputative rhodanese-related sulfur transferase2e-0651.2
NC_019896:1483073:151347915134791514036558Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completehypothetical protein2e-0651.2
NC_000964:2702376:271180327118032712360558Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein2e-0651.2
NC_020210:2133996:213693621369362137301366Geobacillus sp. GHH01, complete genomerhodanese-like protein2e-0650.8
NC_019897:4014485:403059840305984030969372Thermobacillus composti KWC4 chromosome, complete genomerhodanese-related sulfurtransferase3e-0650.4
NC_014831:285759:294172294172294513342Thermaerobacter marianensis DSM 12885 chromosome, complete genomeRhodanese domain protein3e-0650.4
NC_009725:496443:524715524715525281567Bacillus amyloliquefaciens FZB42, complete genomeYrkF4e-0650.1
NC_020134:1783000:1797885179788517995161632Clostridium stercorarium subsp. stercorarium DSM 8532, completeNADH oxidase Nox5e-0649.7
NC_013411:2951559:295274629527462953315570Geobacillus sp. Y412MC61, complete genomeSirA family protein5e-0649.7
NC_014915:2092678:209267820926782093247570Geobacillus sp. Y412MC52 chromosome, complete genomeSirA-like domain-containing protein5e-0649.7
NC_020210:2133996:213603621360362136605570Geobacillus sp. GHH01, complete genomeUPF0033 family protein5e-0649.7
NC_006510:2110430:211043021104302110999570Geobacillus kaustophilus HTA426, complete genomehypothetical protein6e-0649.7
NC_006274:765870:7747077747077763711665Bacillus cereus E33L, complete genomeNADH dehydrogenase1e-0548.9