Pre_GI: BLASTP Hits

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Query: NC_006361:5546232:5556356 Nocardia farcinica IFM 10152, complete genome

Start: 5556356, End: 5557240, Length: 885

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004369:1051013:106199710619971062881885Corynebacterium efficiens YS-314, complete genomeputative ABC transporter permease protein8e-60230
NC_015681:1201926:121237712123771213279903Thermodesulfatator indicus DSM 15286 chromosome, complete genomeurea ABC transporter permease UrtB4e-33141
NC_008781:1038158:1050993105099310525671575Polaromonas naphthalenivorans CJ2, complete genomeinner-membrane translocator4e-32138
NC_015224:1641819:1661643166164316631901548Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,branched chain amino acid ABC transporter permease8e-32137
NC_008800:3123495:3123495312349531250961602Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,branched chain amino acid ABC transporter permease9e-32137
NC_016825:158626:1647071647071662811575Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12urea ABC transporter permease UrtB5e-31135
NC_009778:1717458:1715896171589617174611566Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-31135
NC_009437:2579161:262073926207392621650912Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeinner-membrane translocator5e-30131
NC_009074:2970435:3009836300983630114581623Burkholderia pseudomallei 668 chromosome I, complete sequenceputative amino acid ABC transporter, permease protein6e-30131
NC_013209:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-01, complete genomeamide-urea transporter permease protein2e-29129
NC_017100:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-03, complete genomeamide-urea transporter permease protein2e-29129
NC_017108:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-12, complete genomeamide-urea transporter permease protein2e-29129
NC_017111:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-32, complete genomeamide-urea transporter permease protein2e-29129
NC_017121:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-07, complete genomeamide-urea transporter permease protein2e-29129
NC_017125:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-22, complete genomeamide-urea transporter permease protein2e-29129
NC_017146:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-26, complete genomeamide-urea transporter permease protein2e-29129
NC_017150:160892:177858177858178784927Acetobacter pasteurianus IFO 3283-01-42C, complete genomeamide-urea transporter permease protein2e-29129
NC_008343:2050000:206574320657432066669927Granulibacter bethesdensis CGDNIH1, complete genomeamide-urea transport system permease protein2e-29129
NC_012997:4621764:4638890463889046405811692Teredinibacter turnerae T7901, complete genomeurea ABC transporter, permease protein UrtB1e-28126
NC_017506:2993679:3015708301570830173061599Marinobacter adhaerens HP15 chromosome, complete genomeurea ABC transporter permease UrtB9e-28124
NC_007952:1453000:147894514789451479862918Burkholderia xenovorans LB400 chromosome 2, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit3e-27122
NC_018691:761560:7750947750947766111518Alcanivorax dieselolei B5 chromosome, complete genomeBranched-chain amino acid ABC transporter, permease protein3e-27122
NC_003911:1791878:1825767182576718277221956Silicibacter pomeroyi DSS-3, complete genomebranched-chain amino acid ABC transporter, permease protein4e-27122
NC_013422:1732677:173793617379361738862927Halothiobacillus neapolitanus c2, complete genomeurea ABC transporter, permease protein UrtB5e-24111
NC_013894:672840:686165686165687049885Thermocrinis albus DSM 14484 chromosome, complete genomeinner-membrane translocator2e-21102
NC_020908:5047410:505246350524635053332870Octadecabacter arcticus 238, complete genomeputative high-affinity branched-chain amino acid transport system permease protein2e-1996.3
NC_012988:1817000:182309118230911823975885Methylobacterium extorquens DM4, complete genomeABC transporter9e-1994.4
NC_011757:1553500:155955015595501560434885Methylobacterium chloromethanicum CM4, complete genomeinner-membrane translocator9e-1994.4
NC_007516:2420264:2430867243086724320271161Synechococcus sp. CC9605, complete genomeputative urea ABC transporter2e-1790.1
NC_004113:1137754:1152921115292111540781158Thermosynechococcus elongatus BP-1, complete genomeABC transporter permease protein2e-1789.7
NC_010515:1205258:122021112202111221086876Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceinner-membrane translocator1e-1480.5
NC_014828:2497462:251340325134032514260858Ethanoligenens harbinense YUAN-3 chromosome, complete genomeinner-membrane translocator3e-1272.4
NC_011001:302500:313884313884314672789Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative amino acid transporter2e-1169.7
NC_010170:1219641:122598412259841226847864Bordetella petrii, complete genomeputative branched-chain amino acid transport permease2e-1066.2
NC_014830:3438504:347840034784003479263864Intrasporangium calvum DSM 43043 chromosome, complete genomeinner-membrane translocator8e-1064.7
NC_017506:1100679:112535911253591126222864Marinobacter adhaerens HP15 chromosome, complete genomeinner-membrane translocator1e-0964.3
NC_014974:1076565:109330510933051094168864Thermus scotoductus SA-01 chromosome, complete genomeinner-membrane translocator2e-0963.5
NC_016147:3023180:304308030430803043940861Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative ABC-transporter5e-0962
NC_008212:2978786:299322129932212994147927Haloquadratum walsbyi DSM 16790, complete genomeABC-type urea transport system, permease protein I2e-0859.7
NC_010676:2720068:272545727254572726353897Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator5e-0858.5
NC_007336:66000:717027170272589888Ralstonia eutropha JMP134 megaplasmid, complete sequenceinner-membrane translocator6e-0858.5
NC_007953:504939:514928514928515788861Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit1e-0757.8
NC_009720:464078:466677466677467558882Xanthobacter autotrophicus Py2, complete genomeinner-membrane translocator1e-0653.9
NC_015684:1343251:136214213621421362996855Oligotropha carboxidovorans OM5 chromosome, complete genomeABC transporter permease2e-0653.5
NC_020210:2044944:205128420512842052150867Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter ATP-binding protein2e-0653.1
NC_009434:3434381:345878434587843459671888Pseudomonas stutzeri A1501, complete genomebranched-chain amino acid ABC transporter, permease protein3e-0652.8
NC_012988:4292815:431816243181624319046885Methylobacterium extorquens DM4, complete genomeBranched-chain amino acid ABC transporter permease4e-0652.4
NC_008786:1507139:152574115257411526613873Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator5e-0652
NC_010505:4676403:470123147012314702064834Methylobacterium radiotolerans JCM 2831, complete genomeinner-membrane translocator8e-0651.2