Pre_GI: BLASTP Hits

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Query: NC_006361:4521820:4537947 Nocardia farcinica IFM 10152, complete genome

Start: 4537947, End: 4538939, Length: 993

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009380:4184695:4201321420132142023401020Salinispora tropica CNB-440 chromosome, complete genomeDNA primase, small subunit1e-97356
NC_013235:593289:6138866138866148931008Nakamurella multipartita DSM 44233, complete genomeDNA primase small subunit7e-92337
NC_015573:997629:101297310129731013908936Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA polymerase LigD, polymerase domain-containing protein2e-37156
NC_007644:2146622:215945821594582160396939Moorella thermoacetica ATCC 39073, complete genomehypothetical protein2e-31136
NC_015565:1647554:164872216487221649630909Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA polymerase LigD, polymerase domain-containing protein2e-28126
NC_019673:4687289:4696135469613546971631029Saccharothrix espanaensis DSM 44229 complete genomeputative DNA polymerase, LigD family1e-26120
NC_007508:2941889:2945662294566229482802619Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeATP-dependent DNA ligase2e-24113
NC_003155:3652587:369489236948923695773882Streptomyces avermitilis MA-4680, complete genomeDNA ligase2e-22106
NC_017955:3670670:3674985367498536760521068Modestobacter marinus, complete genomeDNA polymerase LigD2e-22106
NC_013169:2045000:2062906206290620655422637Kytococcus sedentarius DSM 20547, complete genomeDNA ligase D/DNA polymerase LigD3e-22105
NC_009485:8138314:816722581672258168178954Bradyrhizobium sp. BTAi1 chromosome, complete genomeDNA ligase-like protein6e-22105
NC_019903:2708500:2723797272379727262442448Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,ATP-dependent DNA ligase LigD phosphoesterase module9e-22104
NC_007722:851129:8511298511298536482520Erythrobacter litoralis HTCC2594, complete genomehypothetical protein2e-21103
NC_015859:1536439:1537450153745015387781329Corynebacterium variabile DSM 44702 chromosome, complete genomeDNA ligase2e-21103
NC_011071:10842:3104831048335252478Stenotrophomonas maltophilia R551-3, complete genomeDNA ligase D5e-2098.6
NC_010001:2125500:2128734212873421311752442Clostridium phytofermentans ISDg, complete genomeDNA ligase D8e-2097.8
NC_009668:1726000:1741498174149817440022505Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceDNA ligase D1e-1997.4
NC_014830:3870000:389105638910563892018963Intrasporangium calvum DSM 43043 chromosome, complete genomeDNA primase small subunit6e-1891.7
NC_015136:2021799:2024715202471520266731959Burkholderia sp. CCGE1001 chromosome 1, complete sequenceDNA ligase D1e-1687.4
NC_015138:3022414:3039612303961230424222811Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeDNA ligase D2e-1686.7
NC_008782:2683989:2685104268510426876172514Acidovorax sp. JS42, complete genomeDNA ligase (ATP)3e-1685.9
NC_016109:603829:606461606461606982522Kitasatospora setae KM-6054, complete genomehypothetical protein2e-0963.9