Pre_GI: BLASTP Hits

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Query: NC_006361:2920028:2925616 Nocardia farcinica IFM 10152, complete genome

Start: 2925616, End: 2926800, Length: 1185

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019757:5748432:5751595575159557527551161Cylindrospermum stagnale PCC 7417, complete genomerestriction endonuclease S subunit3e-44179
NC_015259:734795:7492687492687504401173Polymorphum gilvum SL003B-26A1 chromosome, complete genomePutative Restriction modification system, type I hsdS4e-28125
NC_011745:2209288:2218310221831022198751566Escherichia coli ED1a chromosome, complete genomeputative type I restriction modification system protein2e-27123
NC_014640:6815264:6824393682439368255951203Achromobacter xylosoxidans A8 chromosome, complete genometype I restriction enzyme StySPI specificity protein2e-25117
NC_007908:1108494:1128342112834211295351194Rhodoferax ferrireducens T118, complete genomerestriction modification system DNA specificity domain3e-25116
NC_016887:3286436:3326449332644933275851137Nocardia cyriacigeorgica GUH-2, complete genomeType I restriction-modification enzyme S subunit, specificity-determinant2e-24114
NC_016027:1902854:1926268192626819274581191Gluconacetobacter xylinus NBRC 3288, complete genometype I DNA specificity S subunit2e-24113
NC_021177:3627947:3640998364099836422091212Streptomyces fulvissimus DSM 40593, complete genomeType I restriction-modification enzyme, specificity subunit3e-24113
NC_009925:647752:6642866642866654341149Acaryochloris marina MBIC11017, complete genometype I restriction-modification enzyme S subunit8e-22105
NC_016943:4799915:481102148110214811941921Blastococcus saxobsidens DD2, complete genomeRestriction endonuclease S subunit2e-21103
NC_013440:3813132:3832106383210638333771272Haliangium ochraceum DSM 14365, complete genomerestriction modification system DNA specificity domain protein7e-21102
NC_016631:3917253:3956143395614339576421500Granulicella mallensis MP5ACTX8 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-20101
NC_016612:2009927:2032911203291120339721062Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction enzyme StySPI specificity protein1e-1997.8
NC_014168:2820315:2831141283114128324901350Segniliparus rotundus DSM 44985 chromosome, complete genomerestriction endonuclease S subunit-like protein1e-1997.8
NC_008312:3728329:3735023373502337362311209Trichodesmium erythraeum IMS101, complete genomerestriction modification system DNA specificity domain3e-1996.7
NC_011083:4547825:4598267459826745994091143Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,restriction modification system DNA specificity domain4e-1996.3
NC_005139:2201820:2215535221553522167041170Vibrio vulnificus YJ016 chromosome I, complete sequencetype I restriction-modification system, endonuclease S subunit6e-1995.5
NC_018876:2151226:2161350216135021625671218Methanolobus psychrophilus R15 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1687.8
NC_008146:4019711:4029860402986040311191260Mycobacterium sp. MCS, complete genomeRestriction endonuclease S subunits-like protein1e-1687.8
NC_008705:4053070:4064342406434240656011260Mycobacterium sp. KMS, complete genomerestriction endonuclease S subunits-like protein1e-1687.8
NC_020450:875757:8959428959428971441203Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme, S subunit2e-1584
NC_015740:141910:1526751526751538201146Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeType I restriction modification DNA specificity domain-containing protein3e-1583.2
NC_008782:3800500:3809732380973238109221191Acidovorax sp. JS42, complete genomerestriction modification system, type I5e-1582.4
NC_012691:1250385:1256400125640012575151116Tolumonas auensis DSM 9187, complete genomerestriction modification system DNA specificity domain protein6e-1582.4
NC_006322:4149500:4166640416664041678031164Bacillus licheniformis ATCC 14580, complete genomehypothetical protein1e-1481.6
NC_006270:4149004:4166525416652541676881164Bacillus licheniformis ATCC 14580, complete genomeHsdS1e-1481.6
NC_011831:2213306:2212048221204822133191272Chloroflexus aggregans DSM 9485, complete genomerestriction modification system DNA specificity domain protein8e-1581.6
NC_012917:3241196:3252422325242232535941173Pectobacterium carotovorum subsp. carotovorum PC1, complete genomerestriction modification system DNA specificity domain protein1e-1481.3
NC_013406:1217385:1237662123766212388161155Paenibacillus sp. Y412MC10 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1480.9
NC_015125:1668780:1680807168080716819851179Microbacterium testaceum StLB037, complete genomerestriction endonuclease S subunits2e-1480.9
NC_004757:2730057:2761384276138427625741191Nitrosomonas europaea ATCC 19718, complete genomeRestriction modification system, type I1e-1480.9
NC_013720:5769910:5786880578688057884331554Pirellula staleyi DSM 6068, complete genomerestriction modification system DNA specificity subunit2e-1480.5
NC_010682:3313944:3325497332549733266811185Ralstonia pickettii 12J chromosome 1, complete sequencerestriction modification system, type I2e-1480.5
CP002185:4750571:4760420476042047614871068Escherichia coli W, complete genomehypothetical protein2e-1480.5
NC_014206:411143:4175314175314187451215Geobacillus sp. C56-T3 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein2e-1480.5
NC_015953:3227000:3236026323602632372041179Streptomyces sp. SirexAA-E chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1480.1
CP002516:4236680:4251283425128342524491167Escherichia coli KO11, complete genomerestriction modification system DNA specificity domain protein3e-1480.1
NC_016902:4236680:4251283425128342524491167Escherichia coli KO11FL chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1480.1
AC_000091:4569379:4584748458474845861421395Escherichia coli W3110 DNA, complete genomespecificity determinant for hsdM and hsdR3e-1480.1
NC_012759:4501206:4516575451657545179691395Escherichia coli BW2952 chromosome, complete genomeEcoKI restriction-modification system protein HsdS3e-1480.1
NC_015578:3495034:350381135038113504440630Treponema primitia ZAS-2 chromosome, complete genometype I site-specific deoxyribonuclease2e-1377.4
NC_020211:554736:5721105721105732821173Serratia marcescens WW4, complete genomerestriction modification system DNA specificity subunit3e-1376.6
NC_007645:5160133:5182397518239751836171221Hahella chejuensis KCTC 2396, complete genomeRestriction endonuclease S subunit4e-1376.3
NC_009338:817854:8285608285608296661107Mycobacterium gilvum PYR-GCK chromosome, complete genomerestriction modification system DNA specificity subunit7e-1375.5
NC_011138:3881446:3898916389891638999981083Alteromonas macleodii 'Deep ecotype', complete genometype I site-specific deoxyribonuclease9e-1375.1
NC_008346:584305:609301609301610092792Syntrophomonas wolfei subsp. wolfei str. Goettingen, completetype I restriction-modification system (specificity subunit)1e-1274.7
NC_016593:416661:4224874224874236651179Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-1274.7
NC_008702:1:90359035103841350Azoarcus sp. BH72, complete genomeType I site-specific deoxyribonuclease3e-1273.2
NC_012962:4591295:4596402459640245975351134Photorhabdus asymbiotica, complete genometype i restriction enzyme ecobi specificity protein (s protein (s.ecobi)6e-1272.4
NC_006350:1084930:1106431110643111077201290Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative type I restriction enzyme specificity protein9e-1271.6
NC_014216:2334568:2339611233961123409301320Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity domain protein1e-1171.6
NC_015578:3495034:3501621350162135027361116Treponema primitia ZAS-2 chromosome, complete genometype I restriction-modification system S subunit2e-1170.9
NC_015711:8852850:8861468886146888629851518Myxococcus fulvus HW-1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-1170.1
NC_013169:2351475:2360619236061923618751257Kytococcus sedentarius DSM 20547, complete genomehypothetical protein3e-1170.1
NC_009051:1074993:1084146108414610853301185Methanoculleus marisnigri JR1, complete genomerestriction modification system DNA specificity domain3e-1170.1
NC_015136:2021799:2033188203318820345191332Burkholderia sp. CCGE1001 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein4e-1065.9
NC_017068:1143515:1184538118453811857701233Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction enzyme, specificity subunit7e-1065.5
NC_015945:1908895:1919789191978919209491161Muricauda ruestringensis DSM 13258 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0964.7
NC_011979:3112911:3123744312374431256781935Geobacter sp. FRC-32, complete genomeRestriction endonuclease S subunit-like protein2e-0964.3
NC_002947:5386489:5396987539698753987171731Pseudomonas putida KT2440, complete genometype I restriction-modification system, S subunit2e-0963.5
NC_008577:2402165:2425817242581724269921176Shewanella sp. ANA-3 chromosome 1, complete sequencerestriction modification system DNA specificity domain5e-0962.4
NC_011071:1178423:1189714118971411908081095Stenotrophomonas maltophilia R551-3, complete genomerestriction modification system DNA specificity domain7e-0962
NC_007086:3805390:3812748381274838140641317Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction endonuclease S subunits9e-0961.6
NC_010688:3740399:3747058374705837483741317Xanthomonas campestris pv. campestris, complete genomeType I site-specific deoxyribonuclease (specificity subunit)9e-0961.6
NC_014934:244587:2445872445872461101524Cellulophaga algicola DSM 14237 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-0860.8
NC_006510:372826:3786463786463796861041Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system S subunit2e-0860.8
NC_010544:313301:322234322234322683450Candidatus Phytoplasma australiense, complete genome2e-0860.5
NC_012669:1700626:1710630171063017119131284Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein4e-0859.3
NC_013169:1410384:1418952141895214200161065Kytococcus sedentarius DSM 20547, complete genomehypothetical protein8e-0858.5
NC_016147:2337244:2348124234812423492871164Pseudoxanthomonas spadix BD-a59 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0757.8
NC_016023:1923170:1932204193220419333851182Bacillus coagulans 36D1 chromosome, complete genomerestriction modification system DNA specificity subunit2e-0757
NC_004369:41236:5092550925521781254Corynebacterium efficiens YS-314, complete genomehypothetical protein3e-0757
NC_018691:3437821:3449748344974834512081461Alcanivorax dieselolei B5 chromosome, complete genomeRestriction modification system DNA specificity domain protein3e-0756.6
NC_015216:1102837:1118283111828311194941212Methanobacterium sp. AL-21 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein6e-0755.8
NC_016803:593484:6016666016666031651500Desulfovibrio desulfuricans ND132 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-0755.1
NC_017068:2055500:2066538206653820676681131Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative type I restriction-modification system specificity subunit2e-0653.9