Pre_GI Gene

Some Help

Host: NC_008782 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008782:3800500 Acidovorax sp. JS42, complete genome

Host Lineage: Acidovorax; Acidovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Acidovorax sp. JS42, formerly Pseudomonas sp. JS42, was isolated from nitrobenzene-contaminated sediment and is capable of using 2-nitrotolulene as a sole carbon and energy source. 2-nitrotolulene, a nitroaromatic compound, is used in the manufacture of dyes, pigments and explosives. Nitroaromatic compounds, which contain an aromatic ring with one or more nitro groups attached, are a significant contaminant in industrial soils. Acidovorax sp. JS42 degrades 2-nitrotolulene by first removing the nitro moiety producing 3-methylcatechol. The enzyme involved in this process, 2-nitrotolulene dioxygenase, has been purified and characterized.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
380084638025581713protein of unknown function DUF262QuickGO ontologyBLASTP
380258238038501269putative transcriptional regulatorQuickGO ontologyBLASTP
380385238067192868SMC domain proteinQuickGO ontologyBLASTP
380673038097323003type I site-specific deoxyribonuclease HsdR familyQuickGO ontologyBLASTP
380973238109221191restriction modification system type IQuickGO ontologyBLASTP
381091538128011887putative transcriptional regulatorQuickGO ontologyBLASTP
381279438143201527N-6 DNA methylaseQuickGO ontologyBLASTP
381431738158191503N-6 DNA methylaseQuickGO ontologyBLASTP
38158163816013198hypothetical proteinBLASTP
38160013816267267hypothetical proteinBLASTP
381628038173681089transposase IS4 family proteinQuickGO ontologyBLASTP
381739938184661068phage integrase family proteinQuickGO ontologyBLASTP
38184633819365903hypothetical proteinBLASTP