Pre_GI: BLASTP Hits

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Query: NC_005363:3562205:3579704 Bdellovibrio bacteriovorus HD100, complete genome

Start: 3579704, End: 3580891, Length: 1188

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015381:2859000:2906549290654929079971449Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-1171.2
NC_009617:3263413:3269030326903032704661437Clostridium beijerinckii NCIMB 8052 chromosome, complete genomehypothetical protein4e-1066.2
NC_014623:6651798:6677958667795866801352178Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein2e-0963.9
NC_010729:1385217:1392638139263813967894152Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein5e-0962.8
NC_020207:1614000:1622902162290216240831182Enterococcus faecium NRRL B-2354, complete genomehypothetical protein6e-0962.4
NC_012560:1677798:168861516886151689499885Azotobacter vinelandii DJ, complete genomehypothetical protein7e-0962
NC_021150:1677811:168862816886281689512885Azotobacter vinelandii CA6, complete genomehypothetical protein7e-0962
NC_012731:2974745:298410029841002984996897Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-0860.5
NC_013739:2106662:212315321231532124025873Conexibacter woesei DSM 14684, complete genomehypothetical protein8e-0858.5
NC_009464:2687445:2696711269671126986181908Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein1e-0758.2
NC_007520:407627:4215274215274229721446Thiomicrospira crunogena XCL-2, complete genomehypothetical protein2e-0757.4
NC_020244:747762:7550637550637563431281Bacillus subtilis XF-1, complete genomeputative phosphohydrolase2e-0757
NC_012491:3736167:3766116376611637695353420Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-0654.7
NC_014500:2688095:269758626975862698464879Dickeya dadantii 3937 chromosome, complete genomeUSG protein2e-0653.9
NC_010688:4991410:500375450037545004611858Xanthomonas campestris pv. campestris, complete genomeSir2-like protein8e-0652