Pre_GI: BLASTP Hits

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Query: NC_005363:3562205:3566308 Bdellovibrio bacteriovorus HD100, complete genome

Start: 3566308, End: 3566910, Length: 603

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015572:2186394:220713222071322207674543Methylomonas methanica MC09 chromosome, complete genomeflavin reductase domain-containing protein FMN-binding protein2e-63241
NC_007759:2179000:219860521986052199057453Syntrophus aciditrophicus SB, complete genomedim6/ntab flavoprotein family4e-58224
NC_015856:268034:272965272965273522558Collimonas fungivorans Ter331 chromosome, complete genomeflavin reductase-like, FMN-binding protein3e-30131
NC_013132:153163:153163153163153723561Chitinophaga pinensis DSM 2588, complete genomeflavin reductase domain protein FMN-binding1e-29129
NC_010501:3448389:346549034654903466047558Pseudomonas putida W619, complete genomeflavin reductase domain protein FMN-binding3e-28124
NC_015137:1207769:121955312195531220215663Burkholderia sp. CCGE1001 chromosome 2, complete sequenceflavin reductase domain-containing protein FMN-binding protein9e-1476.6
NC_011751:1714131:172747217274721728041570Escherichia coli UMN026 chromosome, complete genomehypothetical protein4e-1168.2
NC_011740:1494796:150761115076111508180570Escherichia fergusonii ATCC 35469, complete genomehypothetical protein4e-1167.8
AC_000091:1521976:153499615349961535565570Escherichia coli W3110 DNA, complete genomehypothetical protein6e-1167.4
NC_000913:1517051:153130615313061531875570Escherichia coli K12, complete genomehypothetical protein6e-1167.4
NC_010473:1607646:162190116219011622470570Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein6e-1167.4
NC_012759:1409086:142336514233651423934570Escherichia coli BW2952 chromosome, complete genomehypothetical protein6e-1167.4
NC_011740:1494796:151330215133021513871570Escherichia fergusonii ATCC 35469, complete genomehypothetical protein6e-1167.4
NC_016610:932746:937870937870938436567Tannerella forsythia ATCC 43037 chromosome, complete genomeflavin reductase-like protein7e-1167
NC_010468:2406387:240984524098452410414570Escherichia coli ATCC 8739, complete genomeflavin reductase domain protein FMN-binding1e-1066.2
NC_008563:1577879:159091115909111591480570Escherichia coli APEC O1, complete genomehypothetical protein1e-1065.9
NC_004431:1713141:172804717280471728616570Escherichia coli CFT073, complete genomeHypothetical protein yddH1e-1065.9
NC_007946:1586656:160199316019931602562570Escherichia coli UTI89, complete genomehypothetical protein YddH1e-1065.9
NC_011742:1528668:154400415440041544573570Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1065.9
NC_011745:1581907:159519415951941595763570Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-1065.9
NC_012912:777592:786722786722787300579Dickeya zeae Ech1591, complete genomeflavin reductase domain protein FMN-binding4e-1064.7
NC_016822:1839739:183973918397391840308570Shigella sonnei 53G, complete genomehypothetical protein5e-1064.3
NC_016627:1485799:152121015212101521803594Clostridium clariflavum DSM 19732 chromosome, complete genomehypothetical protein2e-0962.8
NC_016612:5231065:527459452745945275166573Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative flavin reductase domain protein4e-0961.2
NC_016612:5231065:525975552597555260327573Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative flavin reductase domain protein1e-0859.7
NC_020291:1149887:115211611521161152694579Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflavoredoxin-like protein2e-0858.9
NC_010002:4256651:428486042848604285444585Delftia acidovorans SPH-1, complete genomeflavin reductase domain protein FMN-binding2e-0858.9
NC_006624:1448165:146830914683091468830522Thermococcus kodakarensis KOD1, complete genomeflavin reductase-related oxidoreductase6e-0857.4
NC_014307:1855356:188795618879561888546591Ralstonia solanacearum CFBP2957 chromosome, complete genomeNAD(P)h-flavin oxidoreductase1e-0756.6
NC_014150:3139852:316029131602913160794504Brachyspira murdochii DSM 12563 chromosome, complete genomeflavin reductase domain protein FMN-binding protein2e-0755.5
NC_011283:1178500:118039511803951180967573Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein2e-0755.5
NC_015425:1687050:169187616918761692415540Clostridium botulinum BKT015925 chromosome, complete genomeflavin reductase domain-containing protein6e-0754.3
NC_008593:1513107:151580815158081516413606Clostridium novyi NT, complete genomeflavin reductase domain protein, putative7e-0753.9