Pre_GI: BLASTP Hits

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Query: NC_005363:1604337:1630440 Bdellovibrio bacteriovorus HD100, complete genome

Start: 1630440, End: 1631540, Length: 1101

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014640:6745873:6764312676431267654181107Achromobacter xylosoxidans A8 chromosome, complete genomeNAD dependent epimerase/dehydratase family protein 67e-144510
NC_016745:2785346:2792885279288527940031119Oceanimonas sp. GK1 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-142503
NC_008027:1559083:1576865157686515779801116Pseudomonas entomophila L48, complete genomenucleoside-diphosphate-sugar epimerase WbjC2e-139495
NC_010322:1520973:1536073153607315371911119Pseudomonas putida GB-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-137487
NC_009656:1994392:2021096202109620222171122Pseudomonas aeruginosa PA7 chromosome, complete genomeprotein WbjC7e-137486
NC_015379:1887275:1908865190886519099831119Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,NAD dependent epimerase/dehydratase8e-135480
NC_008782:3167440:3195058319505831962091152Acidovorax sp. JS42, complete genomeNAD-dependent epimerase/dehydratase4e-132471
NC_006513:3486558:3502800350280035039271128Azoarcus sp. EbN1, complete genomeprobable NAD dependent epimerase/dehydratase, possibly involved in polysaccharide biosynthesis1e-131469
NC_012660:1804610:1820398182039818215251128Pseudomonas fluorescens SBW25 chromosome, complete genomeNAD dependent epimerase/dehydratase8e-129460
NC_011663:1709003:1728016172801617291191104Shewanella baltica OS223 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-123442
NC_013361:2848949:2857935285793528590411107Escherichia coli O26:H11 str. 11368 chromosome, complete genomeUDP-2-acetamido-2,6-dideoxy-beta-L-talose 4-dehydrogenase2e-123442
NC_015424:3112637:3129941312994131310621122Aeromonas veronii B565 chromosome, complete genomeNAD dependent epimerase/dehydratase3e-122438
NC_013282:2827757:2838121283812128392241104Cronobacter turicensis, complete genomehypothetical protein1e-120433
NC_014313:165490:1792761792761803611086Hyphomicrobium denitrificans ATCC 51888 chromosome, completeNAD-dependent epimerase/dehydratase2e-115416
NC_014220:170021:1767801767801778951116Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeNAD-dependent epimerase/dehydratase1e-96353
NC_021171:4519495:4523662452366245247711110Bacillus sp. 1NLA3E, complete genomecapsular polysaccharide synthesis protein Cap5F2e-96352
NC_011060:514874:5462265462265473441119Pelodictyon phaeoclathratiforme BU-1, complete genomeNAD-dependent epimerase/dehydratase5e-96351
NC_017095:119361:1193611193611204701110Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeWxcM-like protein,NAD dependent epimerase/dehydratase family protein8e-94343
NC_015732:529201:5693055693055704171113Spirochaeta caldaria DSM 7334 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-92339
NC_009253:3272000:3291453329145332925621110Desulfotomaculum reducens MI-1 chromosome, complete genomeNAD-dependent epimerase/dehydratase7e-92337
NC_009483:1936486:1964174196417419653641191Geobacter uraniireducens Rf4 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-91333
NC_015152:272500:2839582839582850671110Spirochaeta sp. Buddy chromosome, complete genomeNAD-dependent epimerase/dehydratase4e-88325
NC_009614:947775:9695659695659707191155Bacteroides vulgatus ATCC 8482 chromosome, complete genomeepimerase/dehydratase, involved in capsular polysaccharide biosynthesis3e-85315
NC_009615:4642500:4667846466784646690541209Parabacteroides distasonis ATCC 8503 chromosome, complete genomecapsular polysaccharide biosynthesis protein Cps4K4e-78291
NC_013410:3280039:3332277333227733334821206Fibrobacter succinogenes subsp. succinogenes S85 chromosome,NAD-dependent epimerase/dehydratase3e-75282
NC_014033:103020:1257981257981269941197Prevotella ruminicola 23 chromosome, complete genomehypothetical protein1e-72273
NC_014151:813755:8292318292318303251095Cellulomonas flavigena DSM 20109 chromosome, complete genomeNAD-dependent epimerase/dehydratase5e-48191
NC_015145:2693749:2715978271597827170691092Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomedTDP-4-dehydrorhamnose 3,5-epimerase-like enzyme4e-47189
NC_014958:3131191:3139989313998931410981110Deinococcus maricopensis DSM 21211 chromosome, complete genomeNAD-dependent epimerase/dehydratase2e-46186
NC_010168:1373337:1379004137900413801131110Renibacterium salmoninarum ATCC 33209 chromosome, complete genomecapsular polysaccharide synthesis enzyme2e-42173
NC_009138:1138917:116755111675511168489939Herminiimonas arsenicoxydans, complete genomeUDP-glucose 4-epimerase (Galactowaldenase) (UDP-galactose 4-epimerase)4e-0962.8
NC_011060:2637893:2644544264454426455451002Pelodictyon phaeoclathratiforme BU-1, complete genomeNAD-dependent epimerase/dehydratase8e-0961.6
NC_015424:3112637:312666031266603127625966Aeromonas veronii B565 chromosome, complete genomeNAD dependent epimerase/dehydratase4e-0859.3
NC_009076:3045139:304956730495673050532966Burkholderia pseudomallei 1106a chromosome I, complete sequenceNAD-dependent epimerase/dehydratase family protein1e-0758.2
NC_006350:3195165:319959331995933200558966Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative epimerase/dehydratase1e-0758.2
NC_009074:3029716:303414330341433035108966Burkholderia pseudomallei 668 chromosome I, complete sequenceNAD-dependent epimerase/dehydratase family protein1e-0758.2
NC_009337:320389:332958332958333950993Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeNAD-dependent epimerase/dehydratase9e-0858.2
NC_009659:2523874:252642925264292527367939Janthinobacterium sp. Marseille chromosome, complete genomenucleoside-diphosphate-sugar epimerase1e-0757.8
NC_007434:3452985:345846934584693459434966Burkholderia pseudomallei 1710b chromosome I, complete sequenceUDP-glucose 4-epimerase1e-0757.8
NC_006348:2071749:207469720746972075662966Burkholderia mallei ATCC 23344 chromosome 1, complete sequenceNAD-dependent epimerase/dehydratase family protein2e-0757.4
NC_008785:914411:931375931375932340966Burkholderia mallei SAVP1 chromosome II, complete sequenceNAD-dependent epimerase/dehydratase family protein2e-0757.4
NC_008836:2780339:279730327973032798268966Burkholderia mallei NCTC 10229 chromosome II, complete sequenceNAD-dependent epimerase/dehydratase family protein2e-0757.4
NC_009080:1815768:181995618199561820921966Burkholderia mallei NCTC 10247 chromosome II, complete sequenceNAD-dependent epimerase/dehydratase family protein2e-0757.4
NC_008740:2905990:293933629393362940283948Marinobacter aquaeolei VT8, complete genomeNAD-dependent epimerase/dehydratase4e-0756.2
NC_008358:1623278:162350116235011624493993Hyphomonas neptunium ATCC 15444, complete genomeputative UDP-glucose 4-epimerase6e-0755.5