Pre_GI: BLASTP Hits

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Query: NC_005140:340000:350458 Vibrio vulnificus YJ016 chromosome II, complete sequence

Start: 350458, End: 350901, Length: 444

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004603:1897532:193544719354471935800354Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeRelB protein2e-63240
NC_002506:370629:433310433310433678369Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completerelB protein1e-52204
NC_002506:324552:343518343518343886369Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completerelB protein1e-52204
NC_009456:787322:801567801567801935369Vibrio cholerae O395 chromosome 1, complete sequenceCopG family transcriptional regulator1e-52204
NC_012583:440420:462007462007462375369Vibrio cholerae O395 chromosome chromosome II, complete sequencerelB protein1e-52204
NC_012667:931390:933475933475933843369Vibrio cholerae MJ-1236 chromosome 2, complete genomeDNA-damage-inducible protein J1e-52204
NC_012667:931390:101783610178361018204369Vibrio cholerae MJ-1236 chromosome 2, complete genomeRelB protein1e-52204
NC_014966:328056:336522336522336806285Vibrio vulnificus MO6-24/O chromosome II, complete sequenceDNA-damage-inducible protein J1e-48191
NC_004460:1618892:162622316262231626507285Vibrio vulnificus CMCP6 chromosome II, complete sequenceDNA-damage-inducible protein J1e-48191
NC_012580:301500:321520321520321840321Vibrio cholerae M66-2 chromosome II, complete sequencerelB protein7e-48188
NC_004603:1897532:192866619286661928950285Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeRelB protein/Vco27A protein1e-47187
NC_014965:1428902:145588614558861456170285Vibrio vulnificus MO6-24/O chromosome I, complete sequenceDNA-damage-inducible protein J9e-45178
NC_016446:119914:133851133851134135285Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeRelB protein2e-43173
NC_016446:49618:685836858368867285Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completeDNA-damage-inducible protein J2e-43173
NC_016945:324519:343334343334343618285Vibrio cholerae IEC224 chromosome II, complete sequenceCopG family transcriptional regulator2e-43173
NC_016945:370471:433129433129433413285Vibrio cholerae IEC224 chromosome II, complete sequenceCopG family transcriptional regulator2e-43173
NC_017269:303500:329994329994330278285Vibrio cholerae LMA3984-4 chromosome II, complete sequenceDNA-damage-inducible protein J2e-43173
NC_014618:4657719:467521146752114675498288Enterobacter cloacae SCF1 chromosome, complete genomeDNA-damage-inducible protein J3e-1167.4
NC_013592:2160000:217939821793982179685288Dickeya dadantii Ech586, complete genomeputative DNA-damage-inducible protein J2e-1064.7
NC_014500:894136:901693901693901977285Dickeya dadantii 3937 chromosome, complete genomeDNA-damage-inducible protein J5e-1063.2
NC_014500:1862000:189256518925651892849285Dickeya dadantii 3937 chromosome, complete genomeDNA-damage-inducible protein J2e-0651.2