Pre_GI: BLASTP Hits

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Query: NC_005139:796546:817406 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 817406, End: 818707, Length: 1302

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009052:4335754:4345846434584643471291284Shewanella baltica OS155, complete genomerestriction modification system DNA specificity domain1e-97357
NC_013037:6281164:6322095632209563233631269Dyadobacter fermentans DSM 18053, complete genomerestriction modification system DNA specificity domain9e-60231
NC_016026:1224129:1234454123445412357431290Micavibrio aeruginosavorus ARL-13 chromosome, complete genometype I restriction modification DNA specificity domain-containing protein3e-50199
NC_017221:535000:5462305462305474921263Bifidobacterium longum subsp. longum KACC 91563 chromosome,restriction endonuclease S subunit1e-40167
NC_014328:303063:3449343449343461871254Clostridium ljungdahlii ATCC 49587 chromosome, complete genometype I restriction enzyme, specificity subunit2e-35150
NC_008054:899441:9101449101449113791236Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit2e-31137
NC_017338:436711:4382604382604394951236Staphylococcus aureus subsp. aureus JKD6159 chromosome, completetype I restriction modification system, site specificity determination subunit, HsdS_13e-30132
NC_011830:4187362:4191475419147541926951221Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein2e-27124
NC_014169:1784435:1795590179559017967861197Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease S subunit4e-27122
NC_016589:183432:2040932040932054061314Burkholderia sp. YI23 chromosome 1, complete sequencerestriction modification system DNA specificity domain-containing protein3e-25116
NC_014169:1784435:1800006180000618010341029Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease S subunit3e-25116
NC_014219:192555:2130542130542142891236Bacillus selenitireducens MLS10 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-25116
NC_008786:3915000:392474739247473925637891Verminephrobacter eiseniae EF01-2, complete genomerestriction modification system DNA specificity domain6e-24112
NC_010581:2999002:3041441304144130426881248Beijerinckia indica subsp. indica ATCC 9039, complete genomerestriction modification system DNA specificity domain2e-23110
NC_015222:3137167:3144490314449031457521263Nitrosomonas sp. AL212 chromosome, complete genomerestriction modification system DNA specificity domain7e-23108
NC_014550:2562053:2590617259061725918701254Arthrobacter arilaitensis Re117, complete genometype I restriction-modification system specificity subunit5e-22105
NC_009953:3224412:3233728323372832349661239Salinispora arenicola CNS-205 chromosome, complete genomerestriction endonuclease S subunits-like protein5e-22105
NC_006513:1547092:1555046155504615563201275Azoarcus sp. EbN1, complete genomerestriction modification system specificity subunit7e-1789
NC_007508:570000:5767025767025779611260Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype I site-specific deoxyribonuclease (specificity subunit)2e-1687.4
NC_008571:744500:7506847506847519401257Gramella forsetii KT0803, complete genometype I restriction-modification system DNA speci ficity subunit3e-1686.7
NC_010682:460523:4806054806054819121308Ralstonia pickettii 12J chromosome 1, complete sequencerestriction modification system DNA specificity domain6e-1582.4
NC_014616:1296287:1306098130609813073361239Bifidobacterium bifidum S17 chromosome, complete genomeHsdS-like protein of Type I restriction-modification system9e-1581.6
NC_010816:2326453:2338749233874923399901242Bifidobacterium longum DJO10A, complete genomeRestriction endonuclease S subunit1e-1481.3
NC_010545:1475410:1490965149096514922001236Corynebacterium urealyticum DSM 7109, complete genometype I restriction-modification system, specificity subunit2e-1377.8
NC_014752:1530000:153766215376621538321660Neisseria lactamica ST-640, complete genomerestriction modification system DNA specificity domain4e-1376.3
NC_010571:1334000:1344968134496813462811314Opitutus terrae PB90-1, complete genomerestriction modification system DNA specificity domain4e-1376.3
NC_020450:875757:8959428959428971441203Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme, S subunit3e-1273.6
NC_008054:899441:9123779123779135401164Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeType I restriction-modification system, specificity subunit4e-1272.8
NC_003272:3275413:3277624327762432789071284Nostoc sp. PCC 7120, complete genometype I restriction-modification enzyme S subunit4e-1272.8
NC_007575:973559:9842349842349854961263Sulfurimonas denitrificans DSM 1251, complete genomerestriction modification system DNA specificity subunit6e-1272.4
NC_013592:446092:4545344545344557241191Dickeya dadantii Ech586, complete genomerestriction modification system DNA specificity domain protein1e-1171.2
NC_015634:2595500:2612515261251526136931179Bacillus coagulans 2-6 chromosome, complete genomehypothetical protein3e-1170.1
NC_009832:4521585:4538281453828145395101230Serratia proteamaculans 568, complete genomerestriction modification system DNA specificity domain7e-1168.9
NC_012779:3316877:333351633335163334487972Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-1168.9
NC_020164:89214:1079251079251090911167Staphylococcus warneri SG1, complete genometype I restriction modification subunit8e-1168.6
NC_004307:2208591:2219603221960322208231221Bifidobacterium longum NCC2705, complete genomeHsdS specificity protein of type I restriction-modification system1e-1068.2
NC_014216:2334568:2339611233961123409301320Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-1066.6
NC_006270:741731:7518027518027529951194Bacillus licheniformis ATCC 14580, complete genomeHsdIB4e-1066.2
NC_006322:741516:7515867515867527791194Bacillus licheniformis ATCC 14580, complete genomehypothetical protein4e-1066.2
NC_014323:5219154:5228943522894352302081266Herbaspirillum seropedicae SmR1 chromosome, complete genomeType I site-specific deoxyribonuclease specificity subunit4e-1066.2
NC_014638:1333976:1345578134557813468191242Bifidobacterium bifidum PRL2010 chromosome, complete genomerestriction endonuclease S subunit9e-1065.1
NC_003902:555699:5640055640055652971293Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative restriction modification system specificity subunit9e-1065.1
NC_007086:557789:5660955660955673871293Xanthomonas campestris pv. campestris str. 8004, complete genomeputative restriction modification system specificity subunit9e-1065.1
AC_000091:4569379:4584748458474845861421395Escherichia coli W3110 DNA, complete genomespecificity determinant for hsdM and hsdR2e-0964.3
NC_012759:4501206:4516575451657545179691395Escherichia coli BW2952 chromosome, complete genomeEcoKI restriction-modification system protein HsdS2e-0964.3
NC_015052:1771976:1781878178187817830351158Bifidobacterium longum subsp. infantis 157F, complete genomerestriction-modification system specificity subunit2e-0963.9
NC_010939:321492:3299713299713311371167Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative Type I restriction enzyme EcoR124II specificity protein3e-0963.5
NC_014314:212579:2201042201042213391236Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completerestriction modification system DNA specificity domain-containing protein9e-0962
NC_014618:690056:7105557105557117391185Enterobacter cloacae SCF1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0861.6
NC_011830:4187362:4193726419372641949671242Desulfitobacterium hafniense DCB-2, complete genomerestriction modification system DNA specificity domain protein1e-0861.2
NC_013949:939695:9490009490009502861287Helicobacter mustelae 12198 chromosome, complete genometype I restriction-modification system S protein2e-0860.8
NC_010278:315941:3251443251443263131170Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,putative type I restriction enzyme specificity protein3e-0860.5
NC_016027:1902854:1926268192626819274581191Gluconacetobacter xylinus NBRC 3288, complete genometype I DNA specificity S subunit1e-0758.2
NC_010994:859500:8739068739068751801275Rhizobium etli CIAT 652, complete genomeprobable type I restriction-modification system protein, specificity subunit1e-0758.2
NC_016023:267581:2798362798362811191284Bacillus coagulans 36D1 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-0758.2
NC_018528:1932000:196291319629131963773861Lactobacillus helveticus R0052 chromosome, complete genometype I restriction endonuclease S subunit3e-0757
NC_015844:3159046:3159046315904631604521407Zobellia galactanivorans, complete genometype I restriction enzyme ZgaDI, S subunit4e-0756.6
NC_015635:4864349:4880217488021748814341218Microlunatus phosphovorus NM-1, complete genometype I restriction-modification system specificity subunit5e-0756.2
NC_013199:845000:8452258452258464061182Lactobacillus rhamnosus Lc 705, complete genometype I restriction modification system DNA specificity domain, enzyme S protein (hsdS)8e-0755.5
NC_003901:2727361:2735284273528427365041221Methanosarcina mazei Go1, complete genometype I restriction-modification system specificity subunit1e-0655.1
NC_014562:3985500:3997879399787939990151137Pantoea vagans C9-1 chromosome, complete genometype I restriction-modification system specificty subunit1e-0654.7
NC_014815:6616500:6671211667121166724521242Micromonospora sp. L5 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-0654.3
NC_010995:764567:7715967715967739832388Cellvibrio japonicus Ueda107, complete genometype I restriction-modification system, S subunit2e-0653.9
NC_015161:1556766:1592163159216315933531191Deinococcus proteolyticus MRP chromosome, complete genomerestriction modification system DNA specificity domain-containing protein3e-0653.1
NC_012108:2194251:2194251219425121955311281Desulfobacterium autotrophicum HRM2, complete genomeHsdS24e-0653.1
NC_017187:814940:8241198241198254171299Arcobacter butzleri ED-1, complete genomerestriction-modification system DNA specificity subunit6e-0652.4
NC_004342:3164500:3178062317806231792971236Leptospira interrogans serovar Lai str. 56601 chromosome I,Type I restriction enzyme EcoprrI specificity protein6e-0652.4
NC_015562:755785:7636407636407649591320Methanotorris igneus Kol 5 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein8e-0652