Pre_GI: BLASTP Hits

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Query: NC_005139:2201820:2275925 Vibrio vulnificus YJ016 chromosome I, complete sequence

Start: 2275925, End: 2276623, Length: 699

Host Lineage: Vibrio vulnificus; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This is a Biotype 1 hospital isolate from Taiwan. It contains larger chromosomes and >1000 genes as compared to Vibrio cholerae and contains a conjugative plasmid, pYJ016. There are numerous virulence factors including a cytolysin, protease, capsular polysaccharide as well as iron-uptake systems encoded in the genome. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Organisms of this species are opportunistic pathogens that can attack immunocompromised patients and causes gastroenteritis (inflammation of mucous membranes of stomach and intestine), wound infections, and primary septicemia (spread of the organism through the blood). This organism is the major cause of death from eating raw oysters, especially in people with liver damage. It only affects humans and other primates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005139:796546:809140809140809859720Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein8e-113405
NC_016944:514742:537558537558538292735Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein1e-1686.7
NC_002505:514732:537550537550538284735Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein2e-1685.9
NC_016147:3349272:335426833542683355230963Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein4e-1685.1
NC_008782:841134:856530856530857519990Acidovorax sp. JS42, complete genomehypothetical protein5e-1684.7
NC_016602:173314:185459185459186193735Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein2e-1582.8
NC_012791:4794362:483328048332804834260981Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein2e-1066.2
NC_011901:1860887:190271019027101903708999Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetranscriptional regulator1e-0756.6